Is your feature request related to a problem? Please describe.
I ran gplearn through a profiler, and I discovered that the with np.errorstate context statement takes a long time, longer than even the numpy function c

The generation of the diagrams for the user manual requires a lot of manual work: trigger the generation and copying the graphs into the right directory. This generation process needs to be unified and automated. Ideally one script call, e.g. generate_graphs.sh, should trigger the generation process and copy the results into the correct directory.

The place where the diagram generation code i

There are apparently as many different approaches in src/clojush/problems as there are files.

We know, because we've wrestled with it, that to build a new problem you need to define a certain set of constants, functions and training and test cases.

I can find no documentation describing what those are.

Many of the most interesting problems are burdened with an ornate pile of spaghetti e

The packed_t is used to pack bits together. However, it seems that perhaps std::bitset might do this better, and also offer more features, functions, etc. It might simplify the code!? and might? run faster?

The Optimizers must all be present in buildOptions for a successful build.
Should be documented (and more clearly named) if this is the correct behavior.

Add debug pacman and ghosts that show where are they going by painting a colored trace on the maze. The color of the trace may vary giving they're hunting, escaping, etc...

Using GameView.addPoints()
i.e: GameView.addPoints(game,Color.BLUE, game.getShortestPath(currentPos, nearestFood));

Implementation

For Ghosts we can create new Classes like StarterGhostsDebug and for our own

I am noticing instructions like _exec_empty cropping up quite a lot. I realize that in Python variable names can only include underscores and Alnum characters, but I wonder if it might make Push code a bit more readable to name these in the Mathematica style: ending in Q (indicating "question", I guess?).

So for example _exec_empty_Q.

Just a minor suggestion. In Clojure implementatio