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icsharpcode / ILSpy

7.5k

.NET Decompiler

decompiler decompiler-engine c-sharp dotnet dotnetcore mono unity pdb ilspy decompile

C# Updated Apr 20, 2019 3 issues need help

inducer / pudb

1.4k

Full-screen console debugger for Python

python debugger pytest pytest-plugin pdb ipython bpython urwid

Python Updated Apr 19, 2019

0xd4d / dnlib

797

Reads and writes .NET assemblies and modules

assembly module reader writer pdb portablepdb windowspdb il cil msil metadata dotnet

C# Updated Apr 20, 2019

spiside / pdb-tutorial

645

A simple tutorial about effectively using pdb

debugger python pdb tutorial

Python Updated Sep 17, 2018

crosire / blink

593

A tool which allows you to edit source code of any MSVC C++ project live at runtime

c-plus-plus linker pdb live-coding

C++ Updated Apr 15, 2019

ajkhoury / ReClassEx

344

ReClassEx

reclass rtti symbols pdb memory-analysis reclassex reclass64 reclassx64 x64 2015 2016 2017 reclass2015 reclass2016 reclass2017

C++ Updated Feb 7, 2019 1 issue needs help

biojava / biojava

300

📖

🔬

☕️ BioJava is an open-source project dedicated to providing a Java library for processing biological data.

bioinformatics java protein-structure genomics protein-sequences protein-modification sequence-alignment structure-alignment protein-data-bank pdb parser-library structural-bioinformatics

Java Updated Apr 21, 2019 11 issues need help

mdtraj / mdtraj

212

A modern, open library for the analysis of molecular dynamics trajectories

molecular-dynamics python mdtraj rmsd dihedral-angles pdb pdb-files molecular-dynamics-trajectories

C Updated Apr 13, 2019

rasbt / biopandas

194

Working with molecular structures in pandas DataFrames

molecular-structures pandas-dataframe pdb mol2 protein-structure molecules pdb-files drug-discovery computational-biology bioinformatics molecule

Python Updated Feb 6, 2019

jasonwhite / ducible

192

A tool to make Windows builds reproducible.

pdb reproducible-builds dll build-automation linux windows visual-studio

C Updated Jun 22, 2018 1 issue needs help

gotcha / vimpdb

163

Pdb and Vim integration

python vim pdb

Python Updated Feb 19, 2017

nblock / pdb-cheatsheet

138

A cheatsheet for the Python Debugger (pdb)

python cheatsheet pdb latex

TeX Updated Feb 16, 2018

sakhnik / nvim-gdb

123

Neovim thin wrapper for GDB, LLDB and PDB

gdb neovim lldb nvim-gdb pdb

Python Updated Mar 31, 2019 2 issues need help

bioSyntax / bioSyntax

116

Syntax highlighting for computational biology

bioinformatics computational-biology syntax-highlighting less vim gedit sublime-text bam vcf fasta pdb

Shell Updated Mar 7, 2019

charnley / rmsd

103

Calculate Root-mean-square deviation (RMSD) of two molecules, using rotation, in xyz or pdb format

rmsd xyz pdb alignment molecule structure reordering kabsch

Python Updated Mar 28, 2019

williamgilpin / pypdb

72

A Python API for the RCSB Protein Data Bank (PDB)

pdb blast proteomics protein-structure protein-sequences proteins protein-data-bank

Python Updated Mar 19, 2019

coddingtonbear / ircpdb

56

Remotely and collaboratively debug your Python application via an IRC channel.

irc pdb python debugging debugger collaborative collaboration

Python Updated Aug 20, 2016

wronglink / pytest-pudb

41

Pytest PuDB debugger integration

python pytest pytest-plugin pudb debugger pdb

Python Updated Oct 30, 2018

willglynn / pdb

40

A parser for Microsoft PDB (Program Database) debugging information

microsoft-pdb pdb debugging rust-library

Rust Updated Apr 9, 2019 3 issues need help

mmagnus / rna-tools

38

🔧rna-tools (prev. rna-pdb-tools): a toolbox to analyze sequences, structures and simulations of RNA - docs @ http://…

rna-puzzle rna-pdb pdb rna rna-structure rosetta simrna

Jupyter Notebook Updated Apr 21, 2019

mittinatten / freesasa

31

C-library for calculating Solvent Accessible Surface Areas

c bioinformatics structural-biology pdb

C Updated Mar 2, 2019

khavernathy / mcmd

29

Monte Carlo and Molecular Dynamics Simulation Package

C++ Updated Mar 17, 2019

mingrammer / pdb-tutorial

29

📖 pdb 튜토리얼 (https://github.com/spiside/pdb-tutorial 한국어 버전)

pdb tutorial translation

Forked from spiside/pdb-tutorial Python Updated Apr 11, 2018

haddocking / pdb-tools

25

A dependency-free cross-platform swiss army knife for PDB files.

python protein pdb pdb-files bioinformatics structural-biology

Python Updated Feb 28, 2019

quangnh89 / DbgSymGrabber

21

Just another tool to download specify Symbol (.pdb) files

pdb windbg symbol-files

C++ Updated Apr 29, 2015

ppillot / libmol

18

Single Page Web Application for displaying and studying molecular models

javascript science molecular-graphics ngl education biological-structures bioinformatics pdb vue

Nearley Updated Mar 27, 2019

rdk / p2rank

17

P2Rank: Protein-ligand binding site prediction tool based on machine learning. Stand-alone command line program / Jav…

bioinformatics machine-learning protein-structure prediction pdb binding-sites proteins ligand inverse-virtual-screening protein-surface structural-bioinformatics protein-ligand-interactions

Groovy Updated Apr 17, 2019

jgreener64 / Molly.jl

17

Molecular dynamics of proteins in Julia

molecular-dynamics julia protein-structure pdb physics-simulation structural-bioinformatics molecular-dynamics-simulation

Julia Updated Apr 17, 2019 1 issue needs help

UCLOrengoGroup / cath-tools

17

Protein structure comparison tools such as SSAP and SNAP

protein ssap orengo cath alignment superposition ucl bioinformatics biology structure cath-resolve-hits pdb

C++ Updated Oct 12, 2018

BioHaskell / hPDB

16

PDB parser in Haskell

protein-structure protein-data-bank file-format pdb hackage pdb-parser haskell

Haskell Updated Jan 28, 2019

pdb

Repositories 128