OpenGene / fastp

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add adapters sequences from BGI/MGI sequencing data to built-in adapters

#259 opened Jun 3, 2020 by guidohooiveld

Feature Request - report adapter names detected/removed

#258 opened May 28, 2020 by chrisgulvik

Mismatches in adapter

#256 opened May 12, 2020 by gatozee

Clarification de novo PE adapter detection

#255 opened May 11, 2020 by vinjana

other adapter sequences?

#252 opened May 9, 2020 by ferreirafm

Option `--trim_poly_g` would benefit from logging/reporting information

#251 opened Apr 29, 2020 by cljacobs

adapters not removed - mismatches insertion/deletion

#250 opened Apr 21, 2020 by marilyne9

Removing poly-A tail

#247 opened Apr 15, 2020 by Behnaz64

undefined short option: -

#246 opened Apr 13, 2020 by Behnaz64

Best practice for preprocessing Nanopore reads

#245 opened Mar 13, 2020 by Luisagi

sample prefixes for fastp.html and fastp.json files

#244 opened Mar 5, 2020 by dougwyu

Add test for input filename = output filename (-i is equal to -o)

#243 opened Feb 27, 2020 by AMChalkie

`--trim_poly_x` like function from 5'

#242 opened Feb 25, 2020 by ghuls

ab-initio adapter detection - incorrect adapter classification

#240 opened Feb 13, 2020 by cpreviti

Fastq files with MS-DOS end-line break

#236 opened Jan 21, 2020 by Erlor

Process paired-end + dual-indexed fastq files

#235 opened Jan 20, 2020 by cziegenhain

Batch processing

#234 opened Jan 17, 2020 by Brendon1991

Trimming Multiple Copies of same adapter.

#233 opened Jan 17, 2020 by PaulAONeill

adapter trimming by overlap analysis

#232 opened Jan 17, 2020 by nyanmo

quit no error

#231 opened Jan 14, 2020 by min1992

umi trimming and deduplication

#230 opened Jan 13, 2020 by HyunjunNam

quality string length is not equal to sequence length

#229 opened Jan 11, 2020 by CharlesAnalyst

Feature request: more support for streams and pipes

#228 opened Jan 10, 2020 by jprnz

How to setup the different filter standard for each reads?

#227 opened Jan 9, 2020 by fengqing-dong

[SUGGESTION] Could RX & QX tags be added to FASTQ?

#226 opened Jan 7, 2020 by Jack-tw

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ProTip! Updated in the last three days: updated:>2020-06-05.