indel

Here are 6 public repositories matching this topic...

ShixiangWang / sigminer

🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html

visualization bioinformatics r somatic-variants easy-to-use sbs somatic-mutations cnv nmf cancer-research dbs mutational-signatures copynumber-signatures indel signature-extraction nmf-extraction cosmic-signatures bayesian-nmf

Updated Mar 17, 2022
R

gear-genomics / tracy

Star

Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files

sequencing alignment crispr-analysis variant-calling pcr tracy crispr-cas9 sanger-chromatograms indel-discovery chromatogram sanger-trace-alignment sanger-sequencing pcr-products genetic-engineering indel

Updated Mar 27, 2022
C++

Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), add synteny among genome fragments or add crosslink among features, add short(PE/MP)/long reads(pacbio or nanopore) mapping or snpindel in vcf(not support complex sv yet), support all CIGAR of sam alignment, directly modify almost all features in Chrome by click the feature