The deepTools ecosystem
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Tools to process and analyze deep sequencing data.
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HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.
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A python extension for quick access to bigWig and bigBed files
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A python library for constructing interval trees with associated exon/annotation information
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C++ implementation of hicBuildMatrix
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python module to plot beautiful and highly customizable genome browser tracks
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Galaxy Docker Image for the HiCExplorer
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Simple web browser to visualize HiC tracks
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A python library for accessing 2bit files
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Docker container for easy deployment of the HiCBrowser
Shell GPL-2.0 UpdatedNov 12, 2017