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Mar 22, 2020 - PHP
viruses
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Since we aim at computers with small RAM, we should detect command errors caused by lack of memory and print more informative message with a possible solution (see issues #189 #176 ).
- Propagation => use less cores
- KLCP & SA construction => don't do it in parallel (@salikhov-kamil, would it improve the footprint of
prophyle_index?)
These errors can easily appear when too many other apps
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Feb 12, 2020 - Nextflow
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Oct 23, 2017 - C++
In the result report, the IGVjs index seems to be to taxing for the browser in some cases. Even when it's on the "Explanation" tab. Cannot think of a good reason why this is, maybe it loads data in the background of the first actual sample in the run? See RUN26 for a demo.
As clamd already has support to run custom scripts.
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Issue summary
When running mailwatch on a system with apache and php-fpm by default php-fpm does not carry the environment through. This means that any execs (getting versions for example) don't work as the environment PATH variable is not set. so nothing is found.
This is not a bug in mailwatch but perhaps should go in the documentation somewhere as it took some time to find out what was