SciCrunch

Repositories

• sparc-curation

  code and files for SPARC curation workflows
  Python MIT 6 2 42 1 Updated Sep 23, 2020

• resource_disambiguator

  Batch processes for RDW
  Java 2 1 0 5 Updated Sep 14, 2020

• NIF-Ontology

  NIF Standard Ontologies (NIFSTD)

  neuroscience owl ontology
  CC-BY-4.0 14 33 134 1 Updated Aug 31, 2020

• paperpdf2xml

  A set of Python 3 CLI to convert scientific papers in PDF format to XML documents with sections and tables.
  Python 0 0 0 0 Updated Aug 27, 2020

• Antibody-Watch

  Antibody Watch: Text Mining Antibody Specificity from the Literature

  natural-language-processing text-mining bioinformatics literature-mining antibody-annotation
  Jupyter Notebook 0 2 0 0 Updated Aug 4, 2020

• scibot

  curation workflow automation and coordination
  Python Apache-2.0 9 19 20 0 Updated Jun 25, 2020

• FAIR-Rich-Metadata

  Specification of FAIR Rich Metadata
  0 0 0 0 Updated Mar 17, 2020

• python-datasets-interface
  Python 1 0 0 0 Updated Feb 3, 2020

• bio-answerfinder

  A question answering system for biomedical literature
  Java 0 5 0 0 Updated Nov 14, 2019

• BICCN-Infrastructure-Draft

  Forked from BICCN/BICCN-Infrastructure-Draft

  Documentation about BICCN Infrastructure and Data Policies
  9 0 0 0 Updated Oct 11, 2019

• Navigator

  A javascript toolkit to embed data and literature search utilizing the Neuroscience Information Framework REST search services.
  JavaScript 1 0 0 0 Updated Apr 16, 2019

• ontoquest

  Ontoquest webservice
  Java 0 0 2 0 Updated Apr 16, 2019

• BulkChanger

  A tool to perform a mass change to a desired element in a desired property in a MediaWiki that implements Semantic MediaWiki and Semantic Forms.
  Java 0 0 0 0 Updated Apr 16, 2019

• rdw

  Resource Disambiguator Web
  Groovy 0 0 0 0 Updated Apr 16, 2019

• SciCrunch-Portal

  SciCrunch Portal
  PHP 0 2 2 0 Updated Apr 16, 2019

• BioMart-harvester

  A BioMart harvester written in PHP to crawl BioMart repositories.
  0 0 0 0 Updated Apr 16, 2019

• OAI-PMH-harvester

  An OAI-PMH harvester written in PHP to crawl OAI repositories. Includes ability to update and restart prior crawls.
  PHP 0 0 2 0 Updated Apr 16, 2019

• SciGraph

  Forked from SciGraph/SciGraph

  A Neo4j backed ontology store
  Java Apache-2.0 44 0 0 0 Updated Apr 15, 2019

• CINERGI-PROV

  Data from CINERGI pipeline and clients to connect to the server
  JavaScript 0 0 0 0 Updated Apr 1, 2015