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Unexpected behaviour of msprime.mutate() when specifying start and end time
#1154 opened Sep 3, 2020 by simonhmartin
Verification tests broken due to discrete recombination maps bug
#1153 opened Sep 2, 2020 by jeromekelleher Release 1.0
[Docs] When, why, how use containers vs conda vs pip
#1144 opened Aug 22, 2020 by castedo
4
[Docs] Update system requirements just before 1.0 as GSL no longer needed for OSX and Linux
#1142 opened Aug 21, 2020 by benjeffery Release 1.0
@benjeffery
1
Split up C unit tests
#1122 opened Aug 12, 2020 by jeromekelleher Release 1.0
3
New top-level function for 1.0
#1119 opened Aug 12, 2020 by jeromekelleher Release 1.0
19
DTWF with floating point coordinates and discrete == True trips assertion bug
#1118 opened Aug 11, 2020 by jeromekelleher Release 1.0
Change to discrete coordinates by default?
#1116 opened Aug 10, 2020 by jeromekelleher Release 1.0
4
Add demographic event for recombination maps enhancement
#1095 opened Jul 7, 2020 by troycomi 0 of 2
3
Problems with DtwfPedigreeVsCoalescent verification tests
#1089 opened Jul 6, 2020 by jeromekelleher
Mutation model conditioned on specific ancestral sequence
#1087 opened Jul 3, 2020 by jeromekelleher 1.1
Script to compare performance with older versions of msprime
#1085 opened Jul 2, 2020 by jeromekelleher
@saunack
1
worry about floating point and probabilities in mutation generation
#1084 opened Jul 1, 2020 by petrelharp Release 1.0
1
@castedo
10
Add model argument to msp mutate CLI
#1077 opened Jun 16, 2020 by jeromekelleher Release 1.0
@winni2k
2
Population.name should enforce that it's a valid Python identifier
#1073 opened Jun 15, 2020 by jeromekelleher Release 1.0
parse_species_tree should create new populations for internal nodes
#1072 opened Jun 15, 2020 by jeromekelleher Release 1.0
API for mutation models
#1070 opened Jun 15, 2020 by jeromekelleher Release 1.0
@benjeffery
Discourage population reuse in demography API?
#1054 opened Jun 2, 2020 by jeromekelleher Release 1.0
6
Test remaining significant tutorial code chunks and save results
#1048 opened May 29, 2020 by jeromekelleher Release 1.0
[Demography] Export Demography description to "demography" format?
#1047 opened May 29, 2020 by jeromekelleher
1
12
clarify recombination docs
#1041 opened May 26, 2020 by petrelharp Release 1.0
Remove extra parameter in DemographicEvent.get_ll_representation
#1037 opened May 24, 2020 by jeromekelleher
Provide APIs for demography equality comparison
#1036 opened May 24, 2020 by jeromekelleher Release 1.0
1
Populations should have string IDs, and these IDs can use used in DemographicEvents
#1033 opened May 21, 2020 by jeromekelleher Release 1.0
Documentation for mutation models
#1024 opened May 12, 2020 by jeromekelleher 0 of 3 Release 1.0
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