Research Unit of Medical Imaging, Physics and Technology

Repositories

• KneeOARSIGrading

  Grading individual knee osteoarthritis features using Deep Learning
  Python 0 9 1 0 Updated May 19, 2020

• Collagen

  Deep Learning Framework for Reproducible Experiments
  Python MIT 0 0 23 (2 issues need help) 1 Updated May 9, 2020

• solt

  Streaming over lightweight data transformations

  deep-learning image-recognition image-segmentation landmark-detection data-augmentation
  Jupyter Notebook MIT 19 245 14 (5 issues need help) 1 Updated May 3, 2020

• semixup

  Semixup: In- and Out-of-Manifold Regularization for Deep Semi-Supervised Knee Osteoarthritis Severity Grading from Plain Radiographs

  regularization knee-osteoarthritis-analysis semixup in-and-out-of-manifold deep-semi-supervise-learning
  Python 1 5 0 1 Updated Apr 27, 2020

• DeepKnee

  Codes for paper: Automatic Knee Osteoarthritis Diagnosis from Plain Radiographs: A Deep Learning-Based Approach

  deep-learning pytorch medical radiology biomedical-engineering knee osteoarthritis
  Jupyter Notebook 26 39 0 0 Updated Apr 8, 2020

• pytorch_bn_fusion

  Batch normalization fusion for PyTorch

  deep-neural-networks deep-learning pytorch batch-normalization inference-optimization
  Python MIT 22 149 2 1 Updated Apr 6, 2020

• OAProgression

  Multimodal Machine Learning-based Knee Osteoarthritis Progression Prediction from Plain Radiographs and Clinical Data

  medicine deep-learning reproducible-research pytorch radiology clinical-data clinical-decision-support
  Python 7 47 1 1 Updated Jan 28, 2020

• 3DHistoGrading

  Software for 3-dimensional grading of osteochondral samples.
  Jupyter Notebook MIT 0 1 6 0 Updated Jan 14, 2020

• RobustCartilageSegmentation
  Python 1 3 0 0 Updated Dec 27, 2019

• DeepKnee-web Archived

  computer-vision xray osteoarthritis
  JavaScript 4 3 0 0 Updated Dec 27, 2019

• KNEEL

  Hourglass Networks for Knee Anatomical Landmark Localization: PyTorch Implementation

  deep-learning pytorch landmark-detection landmark-detectors knee landmark-recognition osteoarthritis
  Python 2 15 0 0 Updated Dec 9, 2019

• ChestBFPN

  Bayesian Feature Pyramid Networks for Chest X-ray Segmentation and Automatic Assessment of Cardio-Thoratic Ratio
  Python MIT 1 0 0 0 Updated Dec 1, 2019

• mCTSegmentation

  Deep-Learning for Tidemark Segmentation in Human Osteochondral Tissues Imaged with Micro-computed Tomography

  deep-learning pytorch 3d pathology micro-ct osteoarthritis
  Python MIT 2 36 0 0 Updated Aug 30, 2019

• LocalBinaryPattern

  Calculates Median robust extended local binary pattern (MRELBP) or local binary pattern (LBP) from images.
  C# MIT 2 3 0 0 Updated Feb 28, 2019

• KneeLocalizer

  Codes for paper: A novel method for automatic localization of joint area on knee plain radiographs by A. Tiulpin et. al.

  medicine computer-vision detection knee osteoarthritis radiographs
  Python MIT 9 6 0 0 Updated Nov 27, 2018

• Oulu-MIPT-ML-Seminar-2018

  Machine Learning seminar tutorials. Spring 2017

  deep-neural-networks pytorch-tutorial
  Jupyter Notebook MIT 0 0 0 0 Updated Mar 16, 2018