Center for Reproducible Neuroimaging Computation

Repositories

• neurodocker

  Generate custom Docker and Singularity images, and minimize existing containers

  linux docker science dockerfile reproducible-research containers neuroscience
  Python Apache-2.0 78 227 76 (5 issues need help) 14 Updated Jul 28, 2021

• reproschema-library
  Python Apache-2.0 5 2 3 1 Updated Jul 20, 2021

• repronim.github.io
  HTML GPL-3.0 8 2 23 0 Updated Jul 15, 2021

• reprostim

  Automated capture of audio-visual stimuli into BIDS datasets

  reproducible-research psychology neuroimaging
  HTML 1 0 11 5 Updated Jul 14, 2021

• ReproLake-misc

  Centralization of the issues discovered with reprolake prototypes etc
  0 0 1 0 Updated Jul 1, 2021

• reproschema-py
  Python Apache-2.0 3 2 4 1 Updated Jun 27, 2021

• reproschema-builder

  a javascript library to build reproschema activity-set and corresponding activities
  JavaScript 6 0 1 3 Updated Jun 18, 2021

• module-stats

  Forked from jbpoline/module-stats

  The statistics for reproducible neuroimaging
  Jupyter Notebook 12 1 7 2 Updated Jun 16, 2021

• demo-protocol

  an example protocol which serves as default protocol in schema-ui
  JavaScript 6 0 2 1 Updated Jun 4, 2021

• testkraken

  Generalized regression testing of scientific workflows
  Python 9 2 26 4 Updated Jun 2, 2021

• coco2019-training

  Training materials for the ReproNim day at https://coastal-coding.github.io
  Jupyter Notebook 5 3 3 3 Updated Jun 1, 2021

• sfn2018-training

  Materials for SfN 2018 training event
  Jupyter Notebook 5 2 12 2 Updated Jun 1, 2021

• containers

  Containers "distribution" for reproducible neuroimaging
  Shell Apache-2.0 8 14 17 1 Updated May 17, 2021

• openneuro-tools
  Dockerfile 0 0 0 0 Updated May 13, 2021

• ReproTube

  Collection (git-annex/DataLad dataset) of educational videos
  0 0 5 0 Updated May 6, 2021

• reproman

  ReproMan (AKA NICEMAN, AKA ReproNim TRD3)
  Python 13 21 124 6 Updated May 5, 2021

• module-reproducible-basics

  Module 0: Reproducible Basics
  JavaScript 12 6 22 2 Updated Apr 28, 2021

• reproschema-ui

  UI to render ReproSchema based protocols and assessments.

  jsonld form-ui
  Vue 10 3 19 1 Updated Apr 18, 2021

• reproschema

  A standardized form generation and data collection schema to harmonize results by design across projects.

  schema interoperability standardizing-assessments clinical-assessments
  Python 18 10 21 (1 issue needs help) 2 Updated Mar 21, 2021

• reproseed

  A POSIX shell script to assist in guaranteeing reproducible non-deterministic computation(s)
  Shell Unlicense 4 7 2 0 Updated Mar 9, 2021

• reproman-slurm

  Container images for ReproMan & slurm CI
  Shell MIT 0 0 0 0 Updated Mar 1, 2021

• ni-terms
  7 1 0 7 Updated Jan 22, 2021

• datalad-nda

  Playground for scripts to ease working with NDA via DataLad
  Python MIT 1 0 0 0 Updated Jan 5, 2021

• reproin

  A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners
  Roff MIT 11 37 26 (1 issue needs help) 1 Updated Dec 23, 2020

• containers-artwork
  Makefile 0 0 0 0 Updated Dec 10, 2020

• artwork

  Some artwork (logos etc)
  R MIT 1 0 0 0 Updated Dec 4, 2020

• webinar-2020-reprocomp
  HTML 0 0 0 0 Updated Dec 4, 2020

• HowWouldReproNim

  Sphinx for rendering the "How Would ReproNim Do That?" series of documents
  Python MIT 3 7 5 0 Updated Oct 5, 2020

• module-FAIR-data
  JavaScript 8 3 2 4 Updated Jun 11, 2020

• module-dataprocessing

  A module for reproducible data processing
  JavaScript 10 1 9 0 Updated Jun 11, 2020