Cytoscape Consortium

Repositories

• cytoscape-automation

  Collection of scripts that include programmatic io and control of Cytoscape
  HTML CC0-1.0 44 48 11 1 Updated Jul 2, 2020

• cy-ndex-2

  A Cytoscape client app for the NDEx database
  Java MIT 1 0 21 1 Updated Jul 2, 2020

• cytoscape-impl

  Cytoscape 3 implementation bundles.
  Java LGPL-2.1 33 24 0 0 Updated Jul 2, 2020

• cyjShiny

  An R/shiny widget for cytoscape.js
  JavaScript MIT 21 70 11 3 Updated Jul 2, 2020

• cytoscape-tutorials

  Collection of modular Cytoscape tutorials for online presentation using reveal.js
  HTML CC0-1.0 80 157 22 (1 issue needs help) 1 Updated Jul 2, 2020

• diffusion

  A Cytoscape app to interface with the heat diffusion service
  Java 2 2 15 1 Updated Jun 30, 2020

• cytoscape.js-cxtmenu

  Context menu for Cytoscape.js

  cytoscapejs cytoscapejs-extension
  JavaScript MIT 63 97 0 0 Updated Jun 27, 2020

• cytoscape.js

  Graph theory (network) library for visualisation and analysis

  javascript analysis network visualisation graph-theory cytoscapejs
  JavaScript 1,246 6,759 9 0 Updated Jun 26, 2020

• cytoscape-api

  Cytoscape 3 API bundles.
  Java LGPL-2.1 24 16 0 0 Updated Jun 26, 2020

• appstore

  Cytoscape App Store web application code
  Python 11 7 21 0 Updated Jun 22, 2020

• cytoscape.js-popper

  A wrapper for Popper.js that lets you position divs relative to Cytoscape elements
  JavaScript MIT 15 37 1 1 Updated Jun 22, 2020

• cytoscape.js-cola

  The Cola.js physics simulation layout for Cytoscape.js

  cytoscapejs cytoscapejs-extension
  JavaScript MIT 39 73 1 1 Updated Jun 21, 2020

• communitydetection-rest-model
  Java BSD-3-Clause 0 0 0 1 Updated Jun 18, 2020

• communitydetection-rest-server

  Community Detection REST Service
  Java BSD-3-Clause 1 0 0 1 Updated Jun 18, 2020

• ndexsearch-rest
  Java 1 0 0 1 Updated Jun 18, 2020

• ndex-enrichment-rest
  Java 2 1 0 1 Updated Jun 18, 2020

• cx

  CX serialization and de-serialization in Cytoscape
  Java 0 1 8 1 Updated Jun 15, 2020

• cytoscape-gui-distribution

  Cytoscape 3 desktop version.
  Java 12 12 0 0 Updated Jun 12, 2020

• cytoscape.js-spread

  The speedy Spread physics simulation layout for Cytoscape.js

  cytoscapejs cytoscapejs-extension
  JavaScript MIT 9 13 1 1 Updated Jun 11, 2020

• search-portal

  Frontend code for the Search Portal.
  JavaScript 3 3 1 0 Updated Jun 11, 2020

• ndex-enrichment-rest-client
  Java 1 0 0 0 Updated Jun 11, 2020

• ndex-interactome-search

  Interactome search service for NDEx iQuery
  Java 2 1 0 0 Updated Jun 11, 2020

• cyBrowser
  Java 2 0 2 0 Updated Jun 8, 2020

• network-merge

  Core App: Network Merge
  Java LGPL-2.1 1 0 0 2 Updated Jun 8, 2020

• cytoscape

  Cytoscape: an open source platform for network analysis and visualization
  Shell 91 300 0 0 Updated Jun 8, 2020

• cytoscape-app-template

  Cytoscape 3 project files for App developers.
  4 1 0 0 Updated Jun 8, 2020

• cytoscape-support

  Cytoscape 3 support bundles.
  Java 4 0 0 0 Updated Jun 8, 2020

• cytoscape-parent

  Cytoscape 3.x parent pom file.
  3 0 0 0 Updated Jun 8, 2020

• cytoscape-explore
  JavaScript MIT 0 4 15 0 Updated Jun 8, 2020

• cytoscape.js-cose-bilkent

  The CoSE layout for Cytoscape.js by Bilkent with enhanced compound node placement.

  cytoscapejs cytoscapejs-extension
  HTML MIT 33 78 19 1 Updated Jun 7, 2020