Kharchenko Lab

Popular repositories

1. conos Public

   R package for the joint analysis of multiple single-cell RNA-seq datasets

   R 123 32

2. pagoda2 Public

   R package for analyzing and interactively exploring large-scale single-cell RNA-seq datasets

   JavaScript 110 35

3. dropEst Public

   Pipeline for initial analysis of droplet-based single-cell RNA-seq data

   C++ 65 36

4. Baysor Public

   Bayesian Segmentation of Spatial Transcriptomics Data

   Julia 32 2

5. vrnmf Public

   Volume-regularized NMF

   R 11 1

6. sccore Public

   Core utilities for single-cell RNA-seq

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