Pinned

1. bioinfologics/sdg

   Sequence Distance Graph framework: graph + reads + mapping + analysis

   C++ 19 4

2. bioinfologics/w2rap-contigger

   An Illumina PE genome contig assembler, can handle large (17Gbp) complex (hexaploid) genomes.

   C++ 40 11

3. EI-CoreBioinformatics/mikado

   Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to select the best models in each locus.

   Python 52 11

4. fa2tree

   Generate a PHYLIP file from different sized fasta files, the markers must have the same starting position but the end is not important

   Python

5. gpuMFEM

   Point Based deformable models implementation, single core, multi-core (OpenMP) and GPU (CUDA)

   Cuda 1

6. ondaCUDA

   Finite differences wave propagation on the GPU

   C++