Centers for Disease Control and Prevention
- Atlanta, GA
- http://open.cdc.gov/
- data@cdc.gov
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SDP-Vocabulary-Service
Repository for the SDP Vocabulary Service.
MicrobeTrace
Forked from AABoyles/MicrobeTraceThe Visualization Multitool for Molecular Epidemiology and Bioinformatics
SDP-Jenkins
Customized Jenkins Docker image for OpenShift using OCP Jenkins S2I builder
SARS-CoV-2_Sequencing
A collection of sequencing protocols and bioinformatic resources for SARS-CoV-2 sequencing.
AlignmentViewer
A lightweight visualization for genetic sequence alignments
geneflow2
GeneFlow: A Workflow Engine for Bioinformatics and Public Health Analytics
TidyTree
Uncompromisingly Flexible Phylogenetic Trees in Javascript
fdns-ui-react
A collection of reusable React components for quickly building modern and accessible web applications.
covid19healthbot
This project collects automated screening protocols and self-checker algorithms from organizations implementing CDC screening protocols in interactive web sites, chat bots, and other technology.
TB_molecular_epidemiology
Algorithms for TB molecular epidemiology analysis
template
Template repository with rules, practices, and privacy, license, records, notices to help programs use the CDCgov GitHub organization.
NeST
Forked from shashidhar22/NeSTBMGAP
The Bacterial Meningitis Genome Analysis Platform, an analysis pipeline, ExpressJS API, and ReactJS webapp for the analysis and characterization of bacterial meningitis samples
cancer-report-validator
The Cancer Report Validator (CRV) is an interactive tool for validating the content of electronic submissions of cancer-related medical information prior to a system's communication with a public health central cancer registry.
fdns-ms-hl7-utils Archived
This is the repository with the HL7 utilities service to parse, validate and generate sample HL7 data.
geneflow-workflows
GeneFlow Public Reference Workflows
CDC-Maps
React component for visualizing your data on a map of the United States based off work done for the CDC
opencdc
This is the repository for the openCDC web site. Entire site is generated from data files describing CDC Open Technology types for data, api, code, and events. All CDC programs are welcome to submit pull requests with updates and new items useful to the public health open source community.
PoSE
PoSE: (Pattern of Sequence Evolution) provides visualization and annotation of amino acid substitutions to help determine major patterns during sequence evolution of protein-coding sequences, hypervariable regions, or changes in dN/dS ratios.