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medical-image-analysis
Here are 82 public repositories matching this topic...
The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.
deep-neural-networks
deep-learning
detection
inference
medical-imaging
segmentation
object-detection
medical-image-computing
semantic-segmentation
3d-models
medical-image-processing
mask-rcnn
u-net
medical-image-analysis
2d-3d
pytorch-cnn
retina-net
3d-object-detection
pytorch-implementation
pytorch-deeplearning
retina-unet
3d-mask-rcnn
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Updated
Apr 30, 2020 - Python
Deep Neural Networks Improve Radiologists' Performance in Breast Cancer Screening
deep-learning
neural-network
tensorflow
pytorch
medical-imaging
classification
pretrained-models
breast-cancer
medical-image-analysis
breast-cancer-diagnosis
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Updated
Mar 20, 2020 - Jupyter Notebook
suyashkumar
commented
Jul 12, 2019
A potentially useful feature for the included CLI (and library) could be converting DICOMs (frames + metadata) into neat tf.Example protocol buffers for downstream use in Tensorflow.
fepegar
opened
Feb 12, 2020
Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.
cancer
resnet
microscopy
sliding-windows
lung
wsi
medical-image-analysis
pathology-image
histopathology-images
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Updated
Apr 20, 2020 - Python
Tensorflow implementation of our paper: Few-shot 3D Multi-modal Medical Image Segmentation using Generative Adversarial Learning
tensorflow
semi-supervised-learning
convolutional-neural-networks
image-segmentation
gans
brain-mri
3d-gan
semi-supervised-gan
medical-image-analysis
few-shot-learning
unet-3d
unet-tensorflow
multi-modal-imaging
iseg-challenge
weightnorm-3d
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Updated
Oct 2, 2019 - Python
COVID-19 imaging-based AI paper collection
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Updated
Jul 13, 2020
Automated lung segmentation in CT
medical-imaging
medical-image-processing
lung-segmentation
medical-image-analysis
chest-ct
lung-disease
covid-19
lung-lobes
covid-19-ct
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Updated
Jun 16, 2020 - Python
This repository contains the code of LiviaNET, a 3D fully convolutional neural network that was employed in our work: "3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study"
deep-neural-networks
theano
deep-learning
architecture
cnn
mri
medical-imaging
neural-networks
deep-learning-algorithms
neuroimaging
convolutional-networks
convolutional-neural-networks
image-segmentation
nifti-format
neuroimage
medical-image-processing
3d-convolutional-network
3d-cnn
scale-study
medical-image-analysis
medical-image-segmentation
brain-segmentation
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Updated
Nov 20, 2019 - Python
A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning
framework
computer-vision
deep-learning
neural-network
tensorflow
medical-imaging
pip
segmentation
convolutional-neural-networks
medical-image-processing
clinical-decision-support
medical-image-analysis
medical-image-segmentation
healthcare-imaging
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Updated
Jul 14, 2020 - Python
This repository contains the code of HyperDenseNet, a hyper-densely connected CNN to segment medical images in multi-modal image scenarios.
deep-neural-networks
theano
deep-learning
cnn
neural-networks
deep-learning-algorithms
segmentation
densenet
fcn
convolutional-neural-networks
weight
image-segmentation
nifti-format
epoch
medical-image-processing
3d-convolutional-network
3d-cnn
medical-image-analysis
medical-image-segmentation
brain-segmentation
hyperdensenet
multi-modal-imaging
segment-medical-images
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Updated
Nov 20, 2019 - Python
Multi-Planar UNet for autonomous segmentation of 3D medical images
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Updated
Jun 30, 2020 - Python
Medical Image Registration
medical-imaging
medical-image-processing
medical-image-analysis
medical-image-registration
tutorial-medical-image-registration
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Updated
Dec 28, 2019 - Jupyter Notebook
Fully automatic brain tumour segmentation using Deep 3-D convolutional neural networks
deep-learning
artificial-intelligence
ensemble-learning
segmentation
brats
medical-image-analysis
deep-convolutional-neural-networks
brain-tumor-segmentation
biomedical-image-analysis
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Updated
Feb 16, 2020 - Python
Detecting Pneumonia in Chest X-ray Images using Convolutional Neural Network and Pretrained Models
tensorflow
keras
medical-imaging
imagenet
image-recognition
convolutional-neural-networks
inception
chest-xray-images
medical-image-computing
inceptionv3
image-detection
deep-convolutional-networks
biomedical-image-processing
keras-tensorflow
medical-image-processing
medical-application
medical-image-analysis
biomedical-applications
biomedical-image-analysis
pneumonia-detection
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Updated
Dec 16, 2018 - Jupyter Notebook
ET-Net: A Generic Edge-aTtention Guidance Network for Medical Image Segmentation
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Updated
Jun 11, 2019
Code for "Generative Image Translation for Data Augmentation in Colorectal Histopathology Images" full paper at ML4H Workshop at NeurIPS 2019.
data-science
machine-learning
artificial-intelligence
medical-imaging
gan
cyclegan
medical-image-analysis
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Updated
Oct 17, 2019 - Python
Deep Attentive Features for Prostate Segmentation in 3D Transrectal Ultrasound
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Updated
Apr 19, 2020 - Python
Code for Paper: Multi Scale Curriculum CNN for Context-Aware Breast MRI Malignancy Classification
detection
pytorch
medical
classification
medical-image-computing
miccai
breast-cancer
medical-image-analysis
breast-cancer-classification
pytorch-implementation
retina-unet
breast-cancer-detection
delira
miccai-2019
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Updated
Feb 5, 2020 - Python
This repository holds the code framework used in the paper Reg R-CNN: Lesion Detection and Grading under Noisy Labels. It is a fork of MIC-DKFZ/medicaldetectiontoolkit with regression capabilites.
deep-learning
detection
object-detection
medical-image-computing
medical-image-processing
mask-rcnn
medical-image-analysis
retinanet
non-maximum-suppression
3d-detection
roialign
3d-object-detection
pytorch-implementation
3d-mask-rcnn
lesion-detection
regression-head
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Updated
Apr 27, 2020 - Python
Optic Disc and Optic Cup Segmentation using 57 layered deep convolutional neural network
ai
deep-learning
artificial-intelligence
segmentation
medical-image-analysis
glaucoma-detection
deep-convolutional-neural-networks
fundus-image-analysis
opticdisk-segmentation
cdr-prediction
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Updated
Dec 12, 2018 - Jupyter Notebook
Repo for Tang et al, bioRxiv 454793 (2018)
machine-learning
deep-learning
convolutional-neural-networks
immunohistochemical-images
alzheimers-disease
dementia
saliency-map
pathology
medical-image-analysis
plaques
explainable-ai
interpretable-machine-learning
amlyoid-plaques
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Updated
Mar 24, 2019 - Jupyter Notebook
Digital Pathology AI
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Updated
Jun 19, 2020 - JavaScript
Kaggle Competitions: Find the nuclei in divergent images to advance medical discovery
kaggle-competition
biometrics
nuclei
biological-data-analysis
image-segmentation
biological-data
u-net
medical-image-analysis
data-science-bowl
elatic-transform
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Updated
Aug 30, 2019 - Python
Joint Semi-supervised Learning of Image Registration and Segmentation
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Updated
Dec 18, 2019 - Python
Project to save innocent infant lives using Cardiotocography and CNN image classification
ecg
image-manipulation
image-classification
physionet
uterine-contractions
fetal-heart-rate
cardiotocography
medical-application
medical-image-analysis
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Updated
May 22, 2019 - Jupyter Notebook
An adaptive threshold based algorithm for optic disc and cup segmentation in fundus images
python
ai
ipynb
cdr
medical-image-processing
medical-image-analysis
cup-segmentation-methods
optic-disc
glaucoma-detection
adaptive-thresholding
fundus-image-analysis
optic-cup
cdr-calculation
optic-cup-disc-segmentation
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Updated
Apr 25, 2019 - Jupyter Notebook
"Capsule Networks against Medical Imaging Data Challenges" - LABELS@MICCAI 2018
deep-learning
tensorflow
mnist
classification
data-augmentation
medical-image-analysis
fashion-mnist
capsnet
capsule-networks
data-challenges
medical-datasets
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Updated
Apr 9, 2020 - Python
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I am not clear about what the iteration means. Could you explain more about it? Also, how is it related to epoch?
Thanks.