Here are
219 public repositories
matching this topic...
Official git repository for Biopython (originally converted from CVS)
Updated
Jul 30, 2020
Python
Efficient pythonic random access to fasta subsequences
Updated
Jul 29, 2020
Python
Ribbon diagrams of proteins in #golang.
Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning applications.
Updated
Jun 29, 2017
Python
A Python Package for Protein Dynamics Analysis
Updated
Jul 30, 2020
Python
Bio4j abstract model and general entry point to the project
Updated
Dec 16, 2016
Java
Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files
Updated
Aug 18, 2019
Python
A dependency-free cross-platform swiss army knife for PDB files.
Updated
Jun 8, 2020
Python
Updated
Jul 27, 2020
Jupyter Notebook
Evolutionary couplings from protein and RNA sequence alignments
Updated
Jul 24, 2020
Jupyter Notebook
Protein-compound affinity prediction through unified RNN-CNN
Updated
Jul 30, 2020
Python
Inclusive model of expression dynamics with metabolic labeling based scRNA-seq and multiomics, vector field reconstruction and potential landscape mapping
Updated
Jul 30, 2020
Python
WebGL-based protein structure viewer
Updated
Jul 29, 2020
JavaScript
View proteins and trajectories in the terminal
Updated
Jul 18, 2020
Python
Deep residual neural network for protein contact/distance prediction developed by Xu group
Updated
Nov 19, 2019
Python
FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioinformatics projects.
Updated
Jan 14, 2020
JavaScript
Python package to annotate and visualize gene fusions.
Updated
Nov 9, 2019
Python
Modelling the Language of Life - Deep Learning Protein Sequences
Updated
Jul 23, 2020
Python
ProteinGCN: Protein model quality assessment using Graph Convolutional Networks
Updated
May 3, 2020
Python
Protein structure comparison tools such as SSAP and SNAP
Nucleotide Archival Format - Compressed file format for DNA/RNA/protein sequences
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
📚 🔬 PIA - Protein Inference Algorithms
Updated
Jul 23, 2020
Java
A suite of tools to explore protein structures with Protein Blocks 🐍
Updated
May 25, 2020
Python
🔬 Train an Amino Acid Embeddings (or a dragon?)
Updated
Apr 16, 2017
MATLAB
ResPRE is an algorithm for protein residue-residue contact-map prediction
Updated
May 20, 2019
Python
MerCat: python code for versatile k-mer counting and diversity estimation for database independent property analysis for meta -ome data
Updated
May 14, 2019
Python
ProtVec can be used in protein interaction predictions, structure prediction, and protein data visualization.
Updated
Mar 30, 2020
Python
Updated
Dec 30, 2019
Python
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