single-cell-genetics

Popular repositories

1. cardelino Public

   Clone identification from single-cell data

   R 43 8

2. cellSNP Public

   Pileup biallelic SNPs from single-cell and bulk RNA-seq data

   Python 42 9

3. cellsnp-lite Public

   Efficient genotyping bi-allelic SNPs on single cells

   C 36 7

4. vireo Public

   Demultiplexing pooled scRNA-seq data with or without genotype reference

   Python 29 10

5. singlecell_neuroseq_paper Public template

   Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation

   Jupyter Notebook 14 4

6. singlecell_endodiff_paper Public

   Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression

   Jupyter Notebook 11 4