#
gene-expression-profiles
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19 public repositories
matching this topic...
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
😎 A curated list of software and resources for exploring and visualizing (browsing) expression data 😎
Deep learning methods for feature selection in gene expression autism data.
Updated
Oct 2, 2019
Jupyter Notebook
Non-Negative Matrix Factorization for Gene Expression Clustering
Updated
Mar 7, 2018
Python
Methods for training and interpreting deep radiogenomic neural networks
Updated
May 4, 2020
Python
Updated
Sep 17, 2020
JavaScript
Shared TREM-1 expression signatures of asthma affection and control
Updated
Mar 22, 2019
HTML
Simple (effin') Enrichment Analysis in R
A multi-response Gaussian model capable of accurately estimating the composition of blood samples from their gene expression profiles. Fit on Affymetrix Gene ST gene expression profiles using the glmnet R package.
Updated
Jun 9, 2020
Jupyter Notebook
Arabidopsis EcoGEx (R-📦 + 🕸️ -App)
NanoString classifier based on NGS training set
The goal of iCTC is to detect whether peripheral blood cells have CTCs (circulating tumor cell) or not.
SPACEGERM shiny app (archived, see GitLab for active fork)
CMap2 Top Coder Data Science Marathon Match
survival of patients using ors on TCGA data
A library and toolkit for common representation and analysis of gene expression profile data
ROSeq - A rank based approach to modeling gene expression with filtered and normalized read count matrix. Takes in the complete filtered and normalized read count matrix, the location of the two sub-populations and the number of cores to be used.
Recurrent Variational Auto gene encoder
Updated
Sep 18, 2020
Python
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