Popular repositories

1. get_jgi_genomes Public

   A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.

   Perl 16 3

2. jsPhyloSVG Public

   JavaScript 13 10

3. orthomcl_tools Public

   A couple of tools I find indispensable for post orthomcl down-stream analysis.

   Perl 10 3

4. taxdump_edit Public

   🌱 ➡️ 🌳 Add new taxa or taxonomic groups to the NCBI Taxdump files

   Perl 7 1

5. gene_prediction_pipeline Public

   Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS

   Shell 6 1

6. sagawe Public

   ⚪ ➡️ 🔍 ℹ️ A suggested workflow, and accompanying scripts, to assemble Single Amplified Genomes (SAGs) from MDA derived Hi/MiSeq (Overlapped) Paired-End Illumina Libraries.

   Shell 5 3