ParBLiSS

FastANI Public
Fast Whole-Genome Similarity (ANI) Estimation

C++ 233 Apache-2.0 38 40 3 Updated Jul 27, 2021
PaSGAL Public
Parallel Sequence to Graph Alignment

C++ 34 MIT 2 3 0 Updated Jul 27, 2021
PairG Public
Pairing reads on genome graphs

C++ 2 Apache-2.0 1 0 1 Updated Apr 8, 2021
refcom Public

C++ 0 Apache-2.0 0 1 0 Updated Mar 8, 2021
kmerind Public
Parallel k-mer indexing for biological sequences

C++ 12 Apache-2.0 9 0 0 Updated Dec 14, 2018
psbec Public
PSbEC is a parallel spectrum-based error correction software.

C++ 0 Apache-2.0 0 0 0 Updated Dec 5, 2018
bruno Public
Distributed Memory De Bruijn Graph Library

C++ 5 Apache-2.0 0 2 0 Updated Aug 24, 2018
kmerhash Public
A parallel DNA k-mer counter based on optimized distributed memory hash tables

C++ 4 Apache-2.0 1 0 0 Updated Aug 17, 2018
par-mhash Public
Parallel Locality-Sensitive Hashing based heuristic algorithm to construct overlap graphs for large genomic datasets

C++ 0 0 0 0 Updated Jul 19, 2018
read_partitioning Public

C++ 0 Apache-2.0 0 0 0 Updated Aug 20, 2017

Pinned