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@sbmlteam

SBML Team

The team supports SBML infrastructure & the SBML community. Note: additional team projects are located in SourceForge at https://sourceforge.net/projects/sbml/

Pinned

  1. jsbml Public

    JSBML is a community-driven project to create a free, open-source, pure Java™ library for reading, writing, and manipulating SBML files (the Systems Biology Markup Language) and data streams. It is…

    Java 33 20

  2. sbml-test-suite Public

    The SBML Test Suite is a conformance testing system. It allows developers and users to test the degree and correctness of the SBML support provided in a software package.

    JavaScript 20 10

  3. moccasin Public

    MOCCASIN translates basic ODE-based MATLAB models of biological processes into SBML format.

    Python 8 2

  4. deviser Public

    Design Explorer and Viewer for Iterative SBML Enhancement of Representations

    C++ 3 5

  5. QtDeviser Public

    DEVISER Edit, an UI for defining DEVISER input files

    NSIS 2

  6. SBMLreporter Public

    SBMLreporter provides a way to read the contents of XML-based SBML files. This is helpful and important for, e.g., error detection, proofreading and model communication. SBMLreporter is a new imple…

    Java 3 1

Repositories

  • sbml-org-website Public

    The source code for the SBML.org website.

    HTML 3 LGPL-2.1 2 7 0 Updated Jan 6, 2022
  • jsbml Public

    JSBML is a community-driven project to create a free, open-source, pure Java™ library for reading, writing, and manipulating SBML files (the Systems Biology Markup Language) and data streams. It is an alternative to the mixed Java/native code-based interface provided in libSBML.

    Java 33 20 16 0 Updated Jan 5, 2022
  • libsbml Public

    LibSBML is a native library for reading, writing and manipulating files and data streams containing the Systems Biology Markup Language (SBML). It offers language bindings for C, C++, C#, Java, JavaScript, MATLAB, Perl, PHP, Python, R and Ruby.

    C++ 12 10 20 2 Updated Jan 3, 2022
  • libCombine Public

    a C++ library for working with the COMBINE Archive format

    C++ 6 BSD-2-Clause 4 4 (1 issue needs help) 0 Updated Nov 30, 2021
  • python-libsbml Public

    Standalone Python package containing libSBML with support for SBML Level 3 Core and accepted SBML Level 3 packages.

    Python 17 6 7 (1 issue needs help) 0 Updated Nov 16, 2021
  • liblx Public

    The XML parser portion of LibSBML as a separate library.

    C++ 0 2 5 2 Updated Oct 7, 2021
  • sbml-test-suite Public

    The SBML Test Suite is a conformance testing system. It allows developers and users to test the degree and correctness of the SBML support provided in a software package.

    JavaScript 20 10 15 1 Updated Oct 6, 2021
  • deviser Public

    Design Explorer and Viewer for Iterative SBML Enhancement of Representations

    C++ 3 LGPL-2.1 5 24 3 Updated Sep 25, 2021
  • sbml-spatial-models Public

    Repository of models to test exchange of sbml-spatial models.

    4 MIT 2 0 1 Updated Sep 17, 2021
  • SBMLreporter Public

    SBMLreporter provides a way to read the contents of XML-based SBML files. This is helpful and important for, e.g., error detection, proofreading and model communication. SBMLreporter is a new implementation of SBML2LaTeX.

    Java 3 LGPL-2.1 1 5 0 Updated Aug 17, 2021
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