Here are
28 public repositories
matching this topic...
QuPath - Open Source Digital Pathology
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Aug 12, 2020
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Java
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Aug 15, 2019
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Java
a generalist algorithm for cellular segmentation
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Aug 9, 2020
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Jupyter Notebook
Usiigaci: stain-free cell tracking in phase contrast microscopy enabled by supervised machine learning
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Sep 22, 2019
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Jupyter Notebook
For cell segmentation and tracking.
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Feb 26, 2020
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Jupyter Notebook
Automated identification of cell boundaries from the pathological video data
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Aug 4, 2018
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Python
PyTorch implementation of several neural network models for cellular image segmentation
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Aug 27, 2019
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Jupyter Notebook
Cell Segmenter using Machine Learning
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Oct 19, 2018
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Python
TDT4265 - Deep Learning and Computer Vision
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Mar 30, 2020
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Jupyter Notebook
(Biological) Cell Proposal Network for Microscopy Image Analysis
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May 23, 2017
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MATLAB
Child repository of Deep-learning-with-PyTorch-and-GCP
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Feb 17, 2020
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A small GUI application for counting cells in microscope images
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Feb 22, 2019
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Python
Iterative H-minima Based Marker-Controlled Watershed for Cell Nucleus Segmentation
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Mar 15, 2017
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MATLAB
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Aug 8, 2020
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Python
Software developed to analyze how polyQ inclusion bodies interact with ER membranes in situ
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Nov 2, 2019
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Python
Real-time, interactive exploration of 3D image stacks
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Nov 25, 2019
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Python
A python script which is used for segmenting cells from provided phase contrast images. This is a university project.
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Aug 4, 2019
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Python
code used in van Raaphorst, Kjos & Veening (2017), Chromosome segregation drives division site selection in Streptococcus pneumoniae, PNAS
Training cell segmentation models using deep learning
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May 12, 2020
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Jupyter Notebook
sicklemia-cell segmentation
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May 8, 2017
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MATLAB
🔬 A U-Net based deep learning architecture for cell segmentation
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May 7, 2019
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Python
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Mar 10, 2017
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Java
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Apr 23, 2018
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Jupyter Notebook
Computer Assisted Segmentation Tool Environment Revisit
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May 16, 2020
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Processing
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Jun 24, 2019
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Python
the GUI tool for taking a region of interest (ROI) from a fluorescence image
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Jul 6, 2020
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MATLAB
Overlapping fluorescent cell segmentation using convex polygon approach developed in Dresden
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Oct 6, 2018
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Jupyter Notebook
Analysis for cell competition phd project
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Jul 29, 2020
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Jupyter Notebook
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