Pinned

1. epipack Public

   Fast prototyping of epidemiological models based on reaction equations. Analyze the ODEs analytically or numerically, or run stochastic simulations on networks/well-mixed systems.

   Python 21 2

2. tacoma Public

   Temporal networks in Python. Provides fast tools to analyze temporal contact networks and simulate dynamic processes on them using Gillespie's SSA.

   C++ 89 8

3. netwulf Public

   Interactive visualization of networks based on Ulf Aslak's d3 web app.

   Python 259 23

4. qsuite Public

   command line tool to provide an easy framework to submit computer simulations of arbitrary variety in parameter space to various cluster frameworks

   Python 6

5. binpacking Public

   Distribution of weighted items to bins (either a fixed number of bins or a fixed number of volume per bin). Data may be in form of list, dictionary, list of tuples or csv-file.

   Python 45 10

6. reaction-diffusion Public

   Some Python examples to obtain reaction-diffusion results and animations.

   Jupyter Notebook 55 12