Here are
55 public repositories
matching this topic...
System for Medical Concept Extraction and Linking
Updated
Jul 2, 2021
Python
Medical Concept Annotation Tool
Updated
Aug 26, 2021
Python
A sophisticated smart symptom search engine
Updated
Nov 19, 2018
JavaScript
Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research
Updated
Jul 4, 2021
JavaScript
A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.
Updated
Aug 11, 2021
Python
Weakly supervised medical named entity classification
Updated
Aug 7, 2021
Python
A near real-time named-entity recognizer
Updated
Aug 16, 2021
Java
Medical Relations and Entities Extraction
Updated
Mar 25, 2021
Python
Radiology Objects in COntext (ROCO): A Multimodal Image Dataset
Updated
Aug 18, 2021
Python
CODER: Knowledge infused cross-lingual medical term embedding for term normalization.
Updated
Jun 30, 2021
Python
UMLS in Python with MongoDB.
Updated
Dec 7, 2018
Python
Classify web visitor queries so you can chart, and respond to, trends in information seeking
Updated
Oct 16, 2019
JavaScript
An R interface for the NLM's UMLS.
🏥 Clinical NER with UMLS lookup 🏥
Updated
Mar 20, 2020
Jupyter Notebook
Rare disease identification from free-text clinical notes with ontologies and weak supervision
OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers
Neural Network models to map mention of a text to corresponding entity in the Knowledge Base
Updated
Aug 21, 2017
Python
Running MedCAT as a RESTful web service
Updated
Aug 2, 2021
Python
💗 npm package for accessing UMLS REST APIs (unofficial)
Updated
Aug 23, 2021
TypeScript
Sparrow AI - API for disease diagnostics
Updated
Aug 25, 2021
Python
Python Wrapper for MetaMap
Updated
Aug 30, 2018
Python
Classify your health/medical/life sciences search terms
Updated
Mar 7, 2020
Jupyter Notebook
UMLS to PostgreSQL with PgAdmin
Updated
Nov 27, 2018
Dockerfile
Extract Unified Medical Language System (UMLS) Concept ID (CUI) and corresponding SNOMED CT from MedGen pages.
Updated
Jan 14, 2021
Python
Autocompletion and synonym suggestions based on an UMLS ontology
Updated
Aug 3, 2021
JavaScript
A parser designed for free text clinical trial eligibility criteria (CTEC)
Updated
Dec 5, 2017
Python
Load UMLS Metathesaurus Files into a SQL Server Database
Updated
May 19, 2019
Batchfile
TREC'15 CDS Competition: WSU-IR at TREC 2015 Clinical Decision Support Track: Joint Weighting of Explicit and Latent Medical Query Concepts from Diverse Sources [code]
A light-weighted UMLS-based data augmentation for biomedical NLP tasks including Named Entity Recognition and sentence classification.
Updated
Apr 6, 2021
Python
A script to process MetaMap results
Updated
Jun 21, 2020
Python
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