OpenWorm

Repositories

• owmeta-core

  Core library for owmeta
  Python MIT 0 0 25 0 Updated Nov 13, 2020

• openworm_docs

  Documentation for OpenWorm
  Python 27 42 25 0 Updated Nov 13, 2020

• geppetto-client

  The web client of a Geppetto application
  JavaScript 2 0 72 3 Updated Nov 12, 2020

• org.geppetto.model.neuroml

  NeuroML Model Bundle for Geppetto
  Java 12 8 4 3 Updated Nov 4, 2020

• owmeta-bundles

  Bundles for owmeta
  0 0 0 0 Updated Oct 28, 2020

• sibernetic

  This is a C++/OpenCL implementation of the PCISPH algorithm supplemented with a set of biomechanics related features applied to C. elegans locomotion
  C 96 250 26 6 Updated Oct 23, 2020

• owmeta

  Unified, simple data access python library for data & facts about C. elegans anatomy

  metadata rdf
  Python MIT 50 129 46 (5 issues need help) 3 Updated Oct 23, 2020

• OpenWormData
  TeX 3 1 0 1 Updated Oct 15, 2020

• hodgkin_huxley_tutorial

  Hodgkin Huxley Tutorial
  Python LGPL-3.0 11 14 3 0 Updated Oct 13, 2020

• org.geppetto.simulation

  Generic simulation bundle for Geppetto
  Java 11 7 1 1 Updated Oct 13, 2020

• org.geppetto.testbackend
  Java 3 0 2 1 Updated Oct 13, 2020

• owmeta-sciunit

  owmeta types for SciUnit and NeuronUnit

  metadata datamanagement owmeta
  Python 0 0 0 0 Updated Oct 12, 2020

• org.geppetto.simulator.external

  Geppetto bundle to add support for external neuronal simulators (NEURON, etc.)
  Python 0 1 2 1 Updated Oct 7, 2020

• c302

  The c302 framework has been moved here from https://github.com/openworm/CElegansNeuroML/tree/master/CElegans/pythonScripts/c302
  Python 13 24 12 (1 issue needs help) 1 Updated Oct 6, 2020

• OpenWorm

  Project Home repo for Central Dockerfile and Project-wide issues

  simulation biology openworm elegans
  Python MIT 141 1,148 39 1 Updated Sep 29, 2020

• org.geppetto

  Geppetto is an open-source platform to build web-based applications to visualize and simulate neuroscience data and models.
  Python 48 185 1 0 Updated Sep 23, 2020

• org.geppetto.frontend.jupyter

  Geppetto Jupyter Notebook Extension
  Python 2 4 3 3 Updated Sep 13, 2020

• org.geppetto.maven

  Maven repository for Geppetto
  0 0 0 1 Updated Sep 9, 2020

• geppetto-application

  Sample Geppetto application
  JavaScript 1 1 15 3 Updated Sep 8, 2020

• rdflib-zodb

  Forked from RDFLib/rdflib-zodb

  RDFLib Store backed by ZODB
  Python 7 0 0 0 Updated Sep 7, 2020

• org.geppetto.core

  Geppetto core bundle
  Java 14 23 4 3 Updated Sep 4, 2020

• org.geppetto.docs

  Repository to host Geppetto documentation
  Python 9 2 3 0 Updated Aug 4, 2020

• robots

  C. elegans robots
  C 8 11 5 0 Updated Aug 1, 2020

• openworm.github.io

  OpenWorm Website
  HTML 32 7 13 0 Updated Jul 20, 2020

• pygeppetto

  Python Library to create, load, edit and save a Geppetto Model
  Python 3 10 3 0 Updated Jul 17, 2020

• org.geppetto.model
  Java 3 0 3 1 Updated Jul 3, 2020

• simple-C-elegans

  Forked from adammarblestone/simple-C-elegans

  Minimalist Python code -- based on OpenWorm and the published literature -- for modeling C. elegans neural network dynamics
  Jupyter Notebook 10 2 0 0 Updated Jun 8, 2020

• org.geppetto.frontend

  Geppetto Java frontend bundle
  Java 25 26 0 0 Updated Jun 4, 2020

• org.geppetto.datasources
  Java 1 1 0 3 Updated Jun 4, 2020

• CElegansNeuroML

  NeuroML based C elegans model, contained in a neuroConstruct project, as well as c302
  Jupyter Notebook 51 125 34 4 Updated Apr 20, 2020