Stephens lab

fastTopics Public
Fast algorithms for fitting topic models and non-negative matrix factorizations to count data.

R 30 3 10 0 Updated Jan 25, 2022
dsc_susierss Public
Companion code repository for the paper, "Fine-mapping from summary data with the Sum of Single Effects model".

R 0 0 0 0 Updated Jan 25, 2022
mashr Public
An R package for multivariate adaptive shrinkage.

R 60 15 37 0 Updated Jan 25, 2022
rss Public
Regression with Summary Statistics.

MATLAB 41 MIT 11 0 1 Updated Jan 24, 2022
susieR Public
R package for "sum of single effects" regression.

R 99 23 25 0 Updated Jan 20, 2022
mr.ash.alpha Public
An R package implementing Mr.ASH method

R 3 0 2 0 Updated Jan 18, 2022
ebnm Public
R package to fit Empirical Bayes Normal Means model.

R 7 7 5 0 Updated Jan 18, 2022
VEB.Boost Public
R package implementing variational Empirical Bayes boosting methods.

R 0 MIT 0 0 0 Updated Jan 16, 2022
udr Public
R package implementing empirical Bayes methods for multivariate normal means.

R 1 1 5 0 Updated Jan 14, 2022
fastTopics-experiments Public
Numerical experiments on fitting non-negative matrix factorizations and topic models.

R 0 MIT 1 0 0 Updated Jan 7, 2022

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