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116 public repositories
matching this topic...
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
Updated
Jul 23, 2021
Jupyter Notebook
Holistically-Nested Edge Detection
Updated
Jun 8, 2021
Python
Tensorflow implementation : U-net and FCN with global convolution
Updated
May 16, 2019
Python
DICOM Image Segmentation with CNNs in Tensorflow
Updated
Feb 27, 2018
Jupyter Notebook
Example of Deconvnet in PyTorch for VGG16
Updated
Aug 30, 2017
Python
Deep Learning based cell composition analysis with Scaden.
Updated
Jun 10, 2021
Python
rsHRF: A Toolbox for Resting State HRF Deconvolution and Connectivity Analysis (MATLAB)
Updated
Jun 25, 2021
MATLAB
You will learn how to recover a motion blur image by Wiener filter
Updated
Aug 20, 2018
MATLAB
Java (ImageJ/Fiji) software package for 3D deconvolution microscopy
A matlab EEG toolbox to perform overlap correction and non-linear & linear regression.
Updated
Jul 2, 2021
MATLAB
Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.
Causal Deconvolution of Networks by Algorithmic Generative Models
A deconvolution framework based on optimization via Optim.jl
Updated
Jul 29, 2021
Julia
ConsensusTME Gene Sets and R Script
Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours
You will learn how to recover an out-of-focus image by Wiener filter
Calibrated inference of spiking from calcium ΔF/F data using deep networks
Updated
Aug 1, 2021
Jupyter Notebook
a fully Bayesian approach to deconvolve tumor microenvironment
CNN based non-blind deconvolution (presented at ICCP 2017)
Iterative unfolding for Python
Updated
Oct 17, 2020
Python
A general framework for optimizing DNN dataflow on systolic array
Updated
Jan 2, 2021
Python
Pixel Consensus Voting for Panoptic Segmentation (CVPR 2020)
Updated
May 26, 2021
Python
Blind deconvolution of motion blur
Updated
May 21, 2021
Python
Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.
Efficient Blind Deblurring under High Noise Levels (with online demo)
Bayeisan inversion to recover Green's functions of receiver-side structures from teleseismic waveforms
Updated
Jan 25, 2019
Fortran
Updated
Jul 21, 2021
MATLAB
Important papers relating to the biology of cell free DNA
A deep neural network for kernel-blind image deblurring
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