A fast and sensitive gapped read aligner
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Updated
Jun 5, 2021 - C++
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read-aligners
Here are 10 public repositories matching this topic...
An ultrafast memory-efficient short read aligner
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Jul 22, 2021 - C++
Arioc: GPU-accelerated DNA short-read alignment
bioinformatics
genomics
gpu
methylation
read-aligners
sequence-alignment
bisulfite-sequencing
dna-sequence-alignment
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Apr 30, 2021
BELLA: a Computationally-Efficient and Highly-Accurate Long-Read to Long-Read Aligner and Overlapper
matrix-multiplication
long-read
read-aligners
spgemm
genome-alignment
overlapper
pacbio-aligner
longread-aligner
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Updated
Jul 21, 2021 - C++
The Modular Aligner and The Modular SV Caller
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Updated
Feb 5, 2021 - C++
Evaluation tools for "A performant bridge between fixed-size and variable-size seeding"
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Sep 22, 2020 - Python
A generic DNA read aligner that allows to use different combinations of seeding and extension algorithms.
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Updated
May 4, 2018 - C
Materials & Methods for CNV calling with Genalice software against a benchmark dataset
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Updated
Jun 6, 2018 - Shell
Materials & Methods for CNV calling with Genalice software against a benchmark dataset
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Updated
Apr 29, 2018 - Shell
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