Cytoscape Consortium

Repositories

• cy-ndex-2

  A Cytoscape client app for the NDEx database
  Java MIT 1 0 21 1 Updated Mar 8, 2021

• cytoscape.js-popper

  A wrapper for Popper.js that lets you position divs relative to Cytoscape elements
  JavaScript MIT 18 50 3 1 Updated Mar 8, 2021

• cytoscape-tutorials

  Collection of modular Cytoscape tutorials for online presentation using reveal.js
  HTML CC0-1.0 93 196 23 (1 issue needs help) 4 Updated Mar 8, 2021

• cytoscape.js-cola

  The Cola.js physics simulation layout for Cytoscape.js

  cytoscapejs cytoscapejs-extension
  JavaScript MIT 47 87 1 1 Updated Mar 8, 2021

• RCy3

  New version of RCy3, redesigned and collaboratively maintained by Cytoscape developer community
  R MIT 15 33 8 0 Updated Mar 8, 2021

• cytoscape.js

  Graph theory (network) library for visualisation and analysis

  javascript analysis network visualisation graph-theory cytoscapejs
  JavaScript 1,356 7,425 9 4 Updated Mar 7, 2021

• LargestSubnetwork

  Select Largest Subnetwork App
  Java MIT 0 1 0 0 Updated Mar 5, 2021

• cytoscape-impl

  Cytoscape 3 implementation bundles.
  Java LGPL-2.1 35 30 0 0 Updated Mar 5, 2021

• py4cytoscape

  Python library for calling Cytoscape Automation via CyREST

  python workflow cytoscape workflow-automation py2cytoscape cytoscape-interfaces
  Python 5 10 13 0 Updated Mar 5, 2021

• cyREST

  Forked from idekerlab/cyREST

  Core App: REST API module for Cytoscape
  JavaScript MIT 25 26 49 0 Updated Mar 5, 2021

• cytoscape-api

  Cytoscape 3 API bundles.
  Java LGPL-2.1 26 17 0 1 Updated Mar 4, 2021

• cytoscape-gui-distribution

  Cytoscape 3 desktop version.
  Java 13 12 0 1 Updated Mar 4, 2021

• cytoscape.github.com

  Cytoscape org web site.
  HTML 15 20 0 1 Updated Mar 4, 2021

• file-transfer-app
  Java MIT 0 1 0 0 Updated Mar 3, 2021

• ndexsearch-rest
  Java 1 0 0 1 Updated Mar 3, 2021

• cytoscape.js-cose-bilkent

  The CoSE layout for Cytoscape.js by Bilkent with enhanced compound node placement.

  cytoscapejs cytoscapejs-extension
  HTML MIT 39 90 19 5 Updated Mar 3, 2021

• cytoscape-explore
  JavaScript MIT 1 7 15 1 Updated Mar 2, 2021

• cx

  CX serialization and de-serialization in Cytoscape
  Java 0 1 8 2 Updated Feb 26, 2021

• appstore

  Cytoscape App Store web application code
  Python 15 9 21 1 Updated Feb 25, 2021

• cytoscape.js-renderer-experiment
  JavaScript MIT 1 0 0 0 Updated Feb 24, 2021

• cytoscape.js-cxtmenu

  Context menu for Cytoscape.js

  cytoscapejs cytoscapejs-extension
  JavaScript MIT 70 120 0 0 Updated Feb 23, 2021

• cytoscape.js-elk

  The ELK layout algorithm adapter for Cytoscape.js
  JavaScript MIT 13 14 0 0 Updated Feb 23, 2021

• cytoscape-admin-scripts

  Build and maintenance scripts for Cytoscape core developers.
  Jupyter Notebook 3 1 1 0 Updated Feb 19, 2021

• cyjShiny

  An R/shiny widget for cytoscape.js
  JavaScript MIT 24 75 13 1 Updated Feb 19, 2021

• communitydetection-rest-server

  Community Detection REST Service
  Java BSD-3-Clause 1 0 0 0 Updated Feb 18, 2021

• ndex-enrichment-rest-client
  Java 1 0 0 1 Updated Feb 18, 2021

• cytoscape.js-compound-drag-and-drop

  Compound node drag-and-drop UI for adding and removing children
  JavaScript MIT 6 12 0 1 Updated Feb 18, 2021

• search-portal

  Frontend code for the Search Portal.
  JavaScript 3 3 1 2 Updated Feb 10, 2021

• communitydetection-rest-model
  Java BSD-3-Clause 0 0 0 0 Updated Feb 10, 2021

• jupyter-bridge

  Bridge enables Jupyter code on remote server to execute HTTP calls on local PC
  Python MIT 2 2 0 0 Updated Feb 9, 2021