Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊
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Jul 28, 2021 - Python
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sciworkflows
Here are 7 public repositories matching this topic...
RNA-seq workflow using STAR and DESeq2
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Jul 28, 2021 - Python
This Snakemake pipeline implements the GATK best-practices workflow
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May 5, 2021 - Python
A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, pedigree, populations) via the unified statistical model of Varlociraptor.
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Jul 21, 2021 - Python
A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.
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Jul 29, 2021 - R
A Snakemake workflow for variant calling with DeepVariant, and optionally joint variant calling using GLnexus.
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Jun 30, 2021 - Python
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Nov 3, 2019
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