Dana Pe'er Lab

Pinned

1. Palantir Public

   Single cell trajectory detection

   Jupyter Notebook 111 30

2. PhenoGraph Public

   Forked from jacoblevine/PhenoGraph

   Subpopulation detection in high-dimensional single-cell data

   Python 41 19

3. Harmony Public

   Harmony framework for connecting scRNA-seq data from discrete time points

   Jupyter Notebook 36 8

4. magic Public

   Forked from KrishnaswamyLab/MAGIC

   MAGIC - imputation and de-noising single-cell RNA seq data sets

   Jupyter Notebook 16 10

5. seqc Public

   Forked from ambrosejcarr/seqc

   Single-Cell Sequencing Quality Control and Processing Software

   Python 12 6

6. cellrank Public

   CellRank is a toolkit to uncover cellular dynamics based on Markov state modeling of single-cell data.