BrainGlobe

Pinned

1. brainrender

   a python based software for visualization of neuroanatomical and morphological data.

   Python 235 44

2. cellfinder

   Automated 3D cell detection and registration of whole-brain images

   Python 94 26

3. bg-atlasapi

   A lightweight python module to interact with atlases for systems neuroscience

   Jupyter Notebook 41 4

4. brainreg

   Automated 3D brain registration with support for multiple species and atlases.

   Python 38 5

5. brainreg-segment

   Segmentation of 3D shapes in a common anatomical space

   Python 10 4

6. morphapi

   Apis to download neuronal morphologies from publicly available datasets

   Python 6 1