amr

Bug Description

For classes such as GenericConstantMaterial that use templating to create non-AD and AD versions, the corresponding documentation pages do not contain a list of input files that use the class even though '!syntax inputs ...' appears in the .md file.

Steps to Reproduce

See https://mooseframework.inl.gov/source/materials/GenericConstantMaterial.html as an example.

Im

castro.change_max = 1.0 means that the timestep can only ever stay the same or decrease relative to its initial value. I think we should disallow this value, I have a hard time imagining a use case for this (if you want a fixed timestep, use fixed_dt, and if you want a timestep cap but still allow the timestep to decrease, use max_dt). It causes problems with the retry functionality.

When creating a new simulation from scratch, I had to bounce between the equations/ folder and the examples/ folder to figure out the syntax for a new set of initial & boundary conditions. Ideally, the examples would be self-contained; from the user's point of view, there's nothing special about boundary_condition_two_interacting_blast_waves, which is exported as part of Trixi's API - it's o

This depends on #57, although #57 will be informed by this issue.

The AMR concept inventory is, as I understand, a fork of Propbank frames. It is packaged with the LDC release which I don't have access to and also raises questions of licensing if I were to include (a derived form of) those in this repository.

There's a plain-text version, that I