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17 Open 31 Closed
17 Open 31 Closed
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Minimum read length needed for genotype_sv?
#65 opened Nov 16, 2020 by martinghunt
FILTER=PASS but FT=FAIL1
#64 opened Nov 15, 2020 by jjfarrell
1
Using a SV vcf from other callers than Manta
#63 opened Nov 12, 2020 by clairemerot
3
graphtyper genotyper_sv ：<error> No regions specified
#60 opened Aug 18, 2020 by y1025i
3
Variant INFO/END position is before POS bug
#59 opened Aug 17, 2020 by seboyden
3
core dumped
#58 opened Aug 15, 2020 by koujiaodahan
11
genotype_sv [W::find_file_url] Failed to open reference "https://www.ebi.ac.uk/ena/cram/md5/6aef897c3d6ff0c78aff06ac189178dd": Protocol not supported
#57 opened Aug 14, 2020 by koujiaodahan
1
How do I connect the input and output of the three software (manta+svimmer+graphtyper)
#56 opened Aug 13, 2020 by koujiaodahan
1
Fatal error "FAI index has no entry" for GRCh38 HLA alt contig bug
#55 opened Aug 6, 2020 by seboyden
6
SV end points for "OG" variants
#54 opened Aug 6, 2020 by MaximilianStammnitz
4
Including advanced options for graphtyper genotype_sv enhancement
#52 opened Jul 27, 2020 by twesigomwedavid
4
How to realign short reads to the graph pan-genome (constructed by GraphTyper construct) ? question
#51 opened Jul 27, 2020 by caixu0518
2
Graphtyper appropriate for low-coverage data (1x) ? question
#50 opened Jul 22, 2020 by clairemerot
1
Realignment stats enhancement
#49 opened Jul 15, 2020 by twesigomwedavid
1
One region in Trio has very slow genotyping
#45 opened Jul 8, 2020 by jjfarrell
5
Some variants missed in the genotype_sv results
#44 opened Jul 2, 2020 by biozzq
1
support for haploid/different ploidy
#16 opened May 22, 2019 by alexweisberg
1
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