nextstrain

Hi there, amazing work!

So, I am Brazilian researcher on drivers of epidemics dynamics, and one the things we try to do is to estimate some parameters to new strain coming, for example, one the first thing we ask for is a representative sample for the data frequencies.

To illustrate, since last week, plots from Covariants.org were used to say that Brazil is nowadays dominated by Delta VOC,

We might want to give users a hint that Nextclade requires a lot of memory in case there are many sequences.

We can simply take fasta files size and upon some threshold to show a reactstrap alert informing users about that fact and recommend them splitting their datasets in multiple chunks as well as common memory-freeing steps.

It is essential to explain that all computation is happening o

I'm curating a list of active repositories that are working on the Covid-19 projects.

Let us make the list more comprehensive and search for similar repos.