SING Group

Repositories

• strep
  Java 0 0 0 3 Updated May 12, 2021

• evoppi-docker

  Docker compose project for deploying EvoPPI in a Docker environment.
  Shell 0 0 0 0 Updated May 11, 2021

• seda

  SEquence DAtaset builder

  java bioinformatics fasta sequences fasta-sequences sequence-dataset-builder
  Java GPL-3.0 1 4 0 1 Updated May 10, 2021

• evoppi-frontend

  Front-end for the EvoPPI application

  web-application protein-protein interactome protein-protein-interaction
  TypeScript GPL-3.0 1 0 0 11 Updated May 9, 2021

• mtc-games

  MultiTaking Cubes - Games
  JavaScript GPL-3.0 0 0 0 7 Updated May 6, 2021

• dreimt-frontend

  An Angular 9 frontend for the DREIMT application

  transcriptomics immune-system drug-repositioning
  TypeScript GPL-3.0 0 0 0 1 Updated May 6, 2021

• bicycle

  bicycle (bisulfite-based methylcytosine caller) is a next-generation sequencing bioinformatics pipeline able to perform a full DNA methylation level analysis

  java cli methylation bisulfite dna-methylation bisulfite-sequencing java-bioinformatics
  Java LGPL-3.0 1 5 4 1 Updated May 6, 2021

• pandrugs-backend

  A Java backend for the PanDrugs application

  bioinformatics database cancer drugs personal-medicine
  Java GPL-3.0 1 3 1 1 Updated May 4, 2021

• pandrugs-frontend

  An AngularJS frontend for the PanDrugs application

  bioinformatics database cancer drugs personal-medicine
  JavaScript GPL-3.0 0 3 2 0 Updated May 4, 2021

• pandrugs-docker

  A Dockerfile to generate an all-in-one pandrugs server
  Dockerfile 2 5 1 0 Updated May 4, 2021

• compi

  Java Framework for Computational Pipelines

  pipeline workflow-engine java-framework pipeline-framework cli-application computational-pipelines
  Java Apache-2.0 0 3 0 2 Updated Apr 28, 2021

• compi-blast-example

  A Compi pipeline based on the Nextflow blast-example: https://github.com/nextflow-io/blast-example
  Dockerfile 0 0 0 0 Updated Apr 27, 2021

• bdp4j

  Big Data Pipelining For Java

  pipeline pipeline-framework java-8
  Java GPL-3.0 0 5 1 1 Updated Apr 26, 2021

• WARCProcessor

  WARCProcessor is a platform independent integrative tool providing specific support to scientists that need to perform experiments in the field of web spam research.
  Java LGPL-3.0 2 0 0 2 Updated Apr 26, 2021

• BDBM

  BLAST DataBase Manager

  java bioinformatics genome genome-annotation blast sequence transcriptome
  Java GPL-3.0 0 2 0 2 Updated Apr 26, 2021

• compi-convenience-scripts

  A repository with convenience scripts for Compi (https://www.sing-group.org/compi/)
  Shell 0 0 0 0 Updated Apr 21, 2021

• nlpa

  Natural Language Pre-processing Architecture
  Java GPL-3.0 2 0 0 1 Updated Apr 2, 2021

• metatax

  Metatax: Metataxonomics with a Compi-based pipeline for Precision Medicine
  Dockerfile 0 0 0 0 Updated Mar 17, 2021

• master-bioinformatica-aplicada-2020-2021

  Machine Learning in Bioinformatics class at the "Máster en Bioinformática Aplicada a Medicina Personalizada y Salud (Curso 2020-2021)"
  Jupyter Notebook 1 0 0 0 Updated Feb 26, 2021

• deep-learning-colonoscopy

  Review in Deep Learning for Polyp Detection and Classification in Colonoscopy.
  8 35 1 0 Updated Jan 25, 2021

• strep_service

  Online preprocessor service
  Java 0 0 0 0 Updated Jan 20, 2021

• dreimt-backend

  A Java backend for the DREIMT application

  transcriptomics immune-system drug-repositioning
  Java GPL-3.0 0 0 0 1 Updated Jan 12, 2021

• warcrepository

  WarcRepository software
  PHP 0 0 0 0 Updated Oct 14, 2020

• bowski4spam
  Java 0 0 0 0 Updated Oct 14, 2020

• sbfr

  Semantic Based Feature Reduction
  Java AGPL-3.0 0 0 0 1 Updated Oct 13, 2020

• GC4S

  GUI Components for (Java) Swing

  java gui library swing gui-components
  Java LGPL-3.0 1 32 0 1 Updated Oct 13, 2020

• evoppi-backend

  Backend for the EvoPPI application

  web-application protein-protein interactome protein-protein-interaction comparative-analysis
  Java GPL-3.0 1 0 0 2 Updated Oct 13, 2020

• ebpf2smtp

  ebpf filter for SMTP
  Python 0 0 0 0 Updated Oct 1, 2020

• dreimt-database

  DREIMT Database Processing project.
  Shell MIT 0 0 0 0 Updated Jul 25, 2020

• compi-rnaseq-pipeline

  A compi RNA-Seq pipeline to perform differential expression.

  rna-seq pipeline differential-expression compi
  Dockerfile 0 0 0 0 Updated Jun 10, 2020