Pinned

1. Start_Here Public

   Navigation links (and brief descriptions) to my repositories.

   2

2. TMT_analysis_examples Public

   Examples of TMT data analyses using R. Links to notebooks and repositories. Also a few spectral counting analyses.

   13 4

3. IRS_validation Public

   Analysis of technical replicate channels to more fully validate the internal reference scaling (IRS) method.

   Jupyter Notebook 3

4. IRS_normalization Public

   An exploration of internal reference scaling (IRS) normalization in isobaric tagging proteomics experiments.

   Jupyter Notebook 11 9

5. PAW_pipeline Public

   A Comet-based, best practices proteomics pipeline.

   Python 22 6

6. fasta_utilities Public

   Utilities for downloading and managing protein FASTA files.

   Python 6 6