seung-lab

Popular repositories

1. connected-components-3d

   Connected components on multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants.

   C++ 111 15

2. euclidean-distance-transform-3d

   Euclidean distance transform for multi-label 3D anisotropic images using marching parabolas.

   C++ 96 22

3. znn-release Archived

   Multi-core CPU implementation of deep learning for 2D and 3D sliding window convolutional networks (ConvNets).

   C++ 93 32

4. cloud-volume

   Read and write Neuroglancer datasets programmatically.

   Python 72 33

5. kimimaro

   Skeletonize densely labeled 3D image segmentations with TEASAR.

   Python 64 11

6. dijkstra3d

   Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes

   C++ 35 7