#
protein
Here are 289 public repositories matching this topic...
Protein Graph Library
bioinformatics
deep-learning
structural-biology
protein-data-bank
protein-structure
computational-biology
pytorch
protein
protein-design
geometric-deep-learning
graph-neural-networks
dgl
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Updated
Aug 13, 2021 - Jupyter Notebook
Ribbon diagrams of proteins in #golang.
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Updated
Feb 20, 2021 - Go
Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning applications.
machine-learning
database
ai
polymer
biology
tensorflow
protein-structure
keras
prediction
dataset
protein
amino-acids
biotechnology
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Updated
Jun 29, 2017 - Python
A dependency-free cross-platform swiss army knife for PDB files.
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Updated
Jul 20, 2021 - Python
Bio4j abstract model and general entry point to the project
java
bioinformatics
database
graph
proteins
protein
gene-ontology
java-8
graph-database
ncbi-taxonomy
graph-databases
property-graph
graph-data
uniprot
bio4j
graph-queries
graph-schema
titan
bio4j-titan
uniref
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Updated
Dec 16, 2016 - Java
Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files
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Updated
Aug 18, 2019 - Python
Evolutionary couplings from protein and RNA sequence alignments
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Updated
May 11, 2021 - Jupyter Notebook
Protein-compound affinity prediction through unified RNN-CNN
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Updated
Jun 22, 2021 - Python
WebGL-based protein structure viewer
nodejs
delphi
webgl
jupyter-notebook
chemical
protein
snp
nucleotide
structure-viewer
3d-structure
3d-viewer
icn3d
protein-viewer
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Updated
Aug 23, 2021 - JavaScript
ProteinGCN: Protein model quality assessment using Graph Convolutional Networks
deep-learning
pytorch
protein
graph-convolutional-networks
graph-neural-networks
protein-model-quality-estimation
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Updated
Oct 27, 2020 - Python
Modelling the Language of Life - Deep Learning Protein Sequences
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Updated
Sep 15, 2020 - Python
View proteins and trajectories in the terminal
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Updated
Aug 8, 2020 - Python
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
bioinformatics
chemistry
structural-biology
molecular-structures
protein-structure
artificial-intelligence
dna
protein
proteomics
docking
peptides
molecular-biology
protein-design
protein-protein-interaction
swarm-intelligence
structural-bioinformatics
protein-dna-interactions
bioinformatics-tool
glowworm-swarm-optimization
protein-docking
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Aug 19, 2021 - C
FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioinformatics projects.
visualization
bioinformatics
sequencing
liftover
dna
protein
alignment
fasta
fluent
ddv
msa
fasta-sequences
bioinformatics-tool
chain-alignment
fluentdna
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Updated
Jul 19, 2021 - JavaScript
Python package to annotate and visualize gene fusions.
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Updated
Nov 9, 2019 - Python
visualization
r
protein-structure
computational-biology
molecular-graphics
protein
computational-chemistry
htmlwidgets
hacktoberfest
3d
molecular-modeling
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Updated
Aug 18, 2021 - JavaScript
Nucleotide Archival Format - Compressed file format for DNA/RNA/protein sequences
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Updated
May 17, 2021 - C
Protein structure comparison tools such as SSAP and SNAP
bioinformatics
biology
pdb
structure
protein
alignment
score
ssap
orengo
cath
superposition
ucl
orengo-group
taylor
protein-structure-comparison
cath-resolve-hits
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Updated
May 30, 2021 - C++
Differentiable molecular simulation of proteins with a coarse-grained potential
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Updated
Jul 15, 2021 - Python
Guided Conditional Wasserstein GAN for De Novo Protein Design
protein-structure
protein
generative-model
generative-adversarial-networks
protein-design
protein-sequence
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Updated
Feb 23, 2021 - Roff
Fast and flexible ORF finder
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Updated
Jul 20, 2021 - Python
Protein cavity identification and automatic subpocket decomposition
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Updated
Feb 3, 2021 - Python
ProtVec can be used in protein interaction predictions, structure prediction, and protein data visualization.
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Updated
Jun 1, 2021 - Python
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
bioinformatics
simulation
proteins
pdb
protein-structure
dna
protein
scientific-computing
swarm
docking
protein-protein
nose
peptides
protein-design
protein-protein-interaction
receptor
ligand
mpi4py
swarm-intelligence
gso
protein-protein-docking
anm
protein-docking-framework
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Updated
Mar 26, 2020 - C++
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Is there a schedule to add the deprecation warning as per:
https://github.com/biopython/biopython/blob/870f623005ed1b95df877f618cbb12a815bd5696/Bio/SeqFeature.py#L158-L175