#
differential-expression
Here are
99 public repositories
matching this topic...
Brings transcriptomics to the tidyverse
Differential expression analysis for single-cell RNA-seq data.
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Jul 15, 2021
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Python
integrated RNA-seq Analysis Pipeline
A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.
Explore and share your scRNAseq clustering results
Compare different differential abundance and expression methods
Porting DESeq2 and DEXSeq into python via rpy2
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Mar 14, 2021
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Jupyter Notebook
Interactive visualizations for differential expression
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Jun 1, 2021
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Python
UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets
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Jul 13, 2021
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Nextflow
ChIP-seq/RNA-seq analysis software suite for gene expression heatmaps
command line bioinformatic scripts written in R
Interactive Differential Expression AnaLysis - DE made accessible and reproducible
Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
Fit generalized linear models in python.
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Jul 15, 2021
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Python
Make rapid visualizations of RNA-seq data in R
A robust model for quantitative comparison of ChIP-Seq data sets.
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May 18, 2020
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Python
Discrete Distributional Differential Expression
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Jan 3, 2019
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Python
Differential analysis of multi-omics data based on the Tweedie distribution
ASAP : Automated Single-cell Analysis Pipeline
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May 15, 2020
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Java
Tutorial for the analysis of scRNA-seq data in R
Create a cromphensive report of DEG list coming from any analysis of RNAseq data
Exhaustive capture of biological variation in RNA-seq data through k-mer decomposition.
Experimental design framework for scRNAseq population studies (eQTL and DE)
An R package to plot interactive three-way differential expression analysis
Automated differential expression analysis for Illumina beadarrays (HT12 V4 arrays).
Code and manuscript files for Aaron's plate effect paper.
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Dec 8, 2017
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PostScript
interactive plots for differential expression analysis
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Feb 13, 2021
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JavaScript
Microarray Analysis Pipeline in Python
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Aug 1, 2019
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Jupyter Notebook
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Dec 21, 2019
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Jupyter Notebook
MOOMIN is a tool for analysing differential expression data
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Jun 29, 2020
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MATLAB
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