evotools

Popular repositories

1. hapbin Public

   Efficient program for calculating Extended Haplotype Homozygosity (EHH) and Integrated Haplotype Score (iHS)

   C++ 34 16

2. nf-LO Public

   A Nextflow workflow to generate lift over files for any pair of genomes

   Nextflow 11 4

3. wBuffaloVsCow Public

   Code accompanying manuscript "Whole genome analysis of water buffalo and global cattle breeds highlights convergent signatures of domestication"

   R 1 2

4. CattleGraphGenomePaper Public

   Set of script for the paper on the cattle graph genome

   Shell 1

5. mm-iHS Public

   Scripts for calculating mm-iHS

   Perl

6. hapbinX Public

   Pairwise version of hapbin (https://github.com/evotools/hapbin) for studying the strength of selection on multi-allelic haplotypes

   C++ 1