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Mar 7, 2022 - MATLAB
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bids
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The MATLAB toolbox for MEG, EEG and iEEG analysis
statistics
analysis
matlab
neuroscience
meg
eeg
connectivity
neuroimaging
bids
brain
beamformer
fieldtrip
ecog
dipole
time-frequency
ieeg
seeg
donders
sappelhoff
commented
Jun 8, 2020
Problem
The sample column in events.tsv encodes the following:
OPTIONAL. Onset of the event according to the sampling scheme of the recorded modality (i.e., referring to the raw data file that the events.tsv file accompanies).
As identified by @robertoostenveld, we do
Validator for the Brain Imaging Data Structure
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Mar 2, 2022 - JavaScript
A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.
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Mar 6, 2022 - JavaScript
Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
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Feb 10, 2022 - Python
MNE-BIDS is a Python package that allows you to read and write BIDS-compatible datasets with the help of MNE-Python.
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Mar 8, 2022 - Python
A Visual Studio extension that enhances development functionality in Business Intelligence Development Studio (BIDS) and SQL Server Data Tools (SSDT).
bi
business-intelligence
bids
visual-studio-extension
ssdt
ssrs
ssis
ssas
reporting-services
integration-services
analysis-services
bids-helper
sql-server-bi
sql-server-data-tools
bi-development-studio
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May 4, 2021 - C#
BIDScoin converts your source-level neuroimaging data to BIDS
plug
conversion
dicom
mri
pet
neuroimaging
bids
nifti
data-sharing
imaging
data-standards
brain-imaging
multiecho
par
rec
deface
multi-echo
multi-echo-combine
step-1b
defacing
parrec
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Mar 8, 2022 - Python
Automatically process entire electrophysiological datasets using MNE-Python.
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Mar 8, 2022 - Python
A free and open platform for analyzing and sharing neuroimaging data
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Mar 3, 2022 - JavaScript
Temporal Network Tools
python
dynamics
network-theory
community-detection
neuroscience
networks
temporal-networks
fmri
bids
time-varying-connectivity
temporal-network-theory
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Jun 3, 2021 - Python
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
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Jan 6, 2022 - Python
sangfrois
commented
Nov 13, 2020
fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st and 2nd-level analysis, as well as multivariate pattern analysis.
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Feb 3, 2022 - MATLAB
Small Animal Magnetic Resonance Imaging via Python.
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Nov 8, 2021 - Python
Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD data, and preprocessed EEG to multi-resolution brain parcellation with corresponding connection matrices.
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Feb 24, 2022 - Python
Website for the Brain Imaging Data Structure standard.
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Feb 18, 2022 - SCSS
micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Readthedoc documentation below
awesome
mri
neuroimaging
imageprocessing
bids
microstructure
diffusion-mri
connectome
resting-state
multimodal
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Mar 7, 2022 - Shell
josephmje
commented
Aug 13, 2020
These can be found by running make lesson-check:
- index.md:6:FIXME: home page introduction
- index.md:14:> FIXME
- reference.md:7:FIXME
- _extras/discuss.md:4:FIXME
- _extras/guide.md:4:FIXME
fMRI Imaging Analysis
python
programming
binder
english
neuroimaging
lesson
fmri
bids
nilearn
pre-alpha
fmri-data-analysis
fmri-analysis
carpentries-incubator
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Nov 8, 2021 - Jupyter Notebook
A conversion tool for creating NDA compatible metadata representation from BIDS datasets.
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Feb 25, 2022 - Python
The Medical Image Analysis Laboratory Super-Resolution ToolKit (MIALSRTK) consists of a set of C++ and Python processing and workflow tools necessary to perform motion-robust super-resolution fetal MRI reconstruction in the BIDS Apps framework.
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Mar 2, 2022 - C++
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The date and time on the output of the running docker container isn't correct, adding a volume "-v /etc/localtime:/etc/localtime:ro" might fix this?
This would help me know how long a process