Broad Institute

Broad Institute of MIT and Harvard

ddp-study-server Public
Pepper Study Server

Java 7 BSD-3-Clause 2 7 32 Updated Jan 27, 2022
covid19-testing Public
COVID-19 Diagnostic Processing Dashboard

HTML 19 MIT 6 2 1 Updated Jan 27, 2022
ddp-angular Public
Angular code for participant-facing pepper studies

TypeScript 1 1 0 15 Updated Jan 27, 2022
ddp-study-manager Public
Pepper Study Manager

Java 4 BSD-3-Clause 3 0 23 Updated Jan 27, 2022
longbow Public
Annotation and segmentation of MAS-seq data

wdl 4 BSD-3-Clause 0 10 0 Updated Jan 27, 2022
gene-hints Public
Discoverability for gene search 🧬 🔍

Python 8 BSD-3-Clause 0 0 0 Updated Jan 27, 2022
gatk Public
Official code repository for GATK versions 4 and up

Java 1,163 470 1,027 (8 issues need help) 90 Updated Jan 27, 2022
seqr Public
web-based analysis tool for rare disease genomics

Python 120 AGPL-3.0 62 59 1 Updated Jan 27, 2022
single_cell_portal_core Public
Rails/Docker application for the Broad Institute's single cell RNA-seq data portal

Ruby 42 BSD-3-Clause 19 0 3 Updated Jan 27, 2022
cromwell Public
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

Scala 766 267 712 64 Updated Jan 27, 2022

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