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Arctic Code Vault Contributor

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Arctic Code Vault Contributor

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@mrc-ide @bacpop
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Pinned

  1. PopPUNK Public

    PopPUNK 👨‍🎤 (POPulation Partitioning Using Nucleotide Kmers)

    Python 44 10

  2. pp-sketchlib Public

    Library of sketching functions used by PopPUNK

    C++ 20 3

  3. mrc-ide/dust Public

    ✨✨✨ Iterate multiple realisations of stochastic models

    C++ 12 1

  4. mgalardini/pyseer Public

    SEER, reimplemented in python 🐍🔮

    Python 53 19

  5. mandrake Public

    Mandrake 🌿 – Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding

    Python 18

  6. bacpop/BacQuerya Public

    Search engine for bacterial genomic information.

    JavaScript

1,344 contributions in the last year

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Contribution activity

February 2022

Created 9 commits in 2 repositories

Created a pull request in bioconda/bioconda-recipes that received 2 comments

Update unitig-caller to v1.2.1

New bifrost library changes some symbols. This rebuild updates those Seqan headers have changed too, so this version updates to support newer versi…

+7 −37 • 2 comments
Opened 1 other pull request in 1 repository
conda-forge/staged-recipes 1 open

Created an issue in seqan/seqan3 that received 3 comments

Possibility of having a single header to include

We are using Seqan3 in a couple of projects, and it is generally working nicely. However, one issue we have is that over time our builds start fai…

3 comments

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