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@epiforecasts

Epiforecasts

Researchers at the London School of Hygiene & Tropical Medicine doing research to forecast infectious diseases and perform real-time analyses.

Pinned

  1. EpiNow2 Public

    Estimate Realtime Case Counts and Time-varying Epidemiological Parameters

    HTML 62 21

  2. covidregionaldata Public

    An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wherever available we also provide data on deaths, hospitalisa…

    R 36 20

  3. covid19.nhs.data Public

    Trust-level COVID-19 hospitalisations in England

    R 4 2

  4. socialmixr Public

    R package for deriving social mixing matrices from survey data.

    R 24 7

  5. omicron-sgtf-forecast Public

    In this work, we use S-gene target failure (SGTF) as a proxy of variant status combined with reported case counts to explore the evidence for changes in transmission advantage over time for the Omi…

    R 14 5

  6. scoringutils Public

    Utilities for Scoring and Assessing Predictions

    R 10 5

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