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scientific-visualization
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Summary of feature
Math library has 2D and 3D common shape types like Ray2D, Ray3D, Cube, Sphere, etc
It could be useful to have Ray2D and Ray3D to have methods to return the intesection with shapes and volumes.
Also, test methods to get whether shapes and volumens overlap.
Comments
Area/volume overlapping is a very common practice for graphics development in areas like frutum c
Discussed in pyvista/pyvista#2225
Originally posted by tkoyama010 February 17, 2022
I found that some pyvista.wrap(alg.GetOutput()) is still left in the source code. This can be fixed to _get_output(alg).
https://github.com/pyvista/pyvista/search?q=pyvista.wrap%28alg.GetOutput%28%29%29
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.... and that maybe fine.... If you decide this is of no interest, that is very helpful too!
Details:
Structures Models of long transcripts (like Human gene TTN with over 30,000 residues) need residue numbering > 9999
Obviously, MMCIF format is the solution of the RCSB/PDBe
The UCSF Sali Lab Modbase group has adopted hybrid-36 format for these models. I left one of their models here
Support xyz format?
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Currently the measurement plane is a rectangle defined by the 2 smaller principal axes. Add options to show a disc/circle. This can use code from the membrane orientation visual.
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In the CLI manual I noticed a couple of incorrect examples.
- GetQueryOutputObject example uses GetQueryOutputString and GetQueryOutputValue
- GetQueryOutputString example uses both GetQueryOutputString and GetQueryOutputValue
- GetQueryOutputValue example uses both GetQueryOutputString and GetQueryOutputValue
- GetQueryOutputXML example uses GetQueryOutputString and GetQueryOutputValue
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This will allow the cylinder to have the same behavior when picking vertices or edges as with other primitives.
However, we should also keep repeat_sources as a secondary option just in case we need to use some of the other VTK filters.
See an example of box actor (using repeat_primitives) here https://github.com/fury-gl/fury/blob/master/fury/actor.py#L1696
See the current implementation
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I don't think this is a duplicate ticket, even though it's quite an obvious feature after that cat demo at SciPy2018.
The code that selects and renders the different geos is here in the THREE.js code
https://github.com/maartenbreddels/ipyvolume/blob/master/js/src/scatter.js#L57
I don't know quite where/how to inject the mesh definition compatible with the data file of this form, but i