#

pathogens

Here are 13 public repositories matching this topic...

globalcitizen / 2019-wuhan-coronavirus-data

2019 Wuhan Coronavirus data (COVID-19 / 2019-nCoV)

opendata viruses virology pandemic pathogens wuhan 2019-ncov 2019ncov coronavirus epedemiology epedemic covid-19 covid-virus covid19 covid19-data

Updated Mar 22, 2020
PHP

MicrobeTrace

CDCgov / MicrobeTrace

The Visualization Multitool for Molecular Epidemiology and Bioinformatics

bioinformatics genomics phylogenetic-trees phylogenetics epidemiology network-visualization hiv cdc phylogenomics phylogeny sequence-alignment genomic-data-analysis genomics-visualization pathogens

Updated May 19, 2022
TypeScript

bacpop / mandrake

Mandrake 🌿 – Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding

genomics gpu cuda embedding pathogens

Updated May 9, 2022
Python

ncrna / PathogenTrack

A pipeline to identify pathogenic microorganisms from scRNA-seq raw data.

bioinformatics ngs metagenomics scrna-seq viruses bacteria pathogens covid-19

Updated Jan 28, 2022
Python

Dcoronariae_Popgen

dendrologicus / Dcoronariae_Popgen

Multiplexed SSR marker analysis of Diplocarpon coronariae reveals clonality within samples from Middle Europe and genetic distance from Asian and North American isolates

apple rstudio rstats population-genetics pathogens

Updated Mar 22, 2021

dendrologicus / PRRC_qPCR_T18

Untangling the pea root rot complex leads to the identification of microbial markers for plant health

agriculture rstudio rstats qpcr pathogens

Updated Mar 21, 2021

aprank

trypanosomatics / aprank

This is APRANK, an Antigenic Protein and Peptide Ranker.

pathogens epitopes antigenicity antigens

Updated Feb 21, 2022
R

emdelponte / pyblastr

Tracking the movement of cereal blast caused by Pyricularia

dashboard plant diseases wheat pathogens

Updated Jul 20, 2021
HTML

psasickness / psasickness.github.io

css html chrome google school js analytics pathogen psa google-analytics safari project edge sickness pathogens

Updated Dec 14, 2017
JavaScript

tim-peterson / sphingolipids-pathogens-aging

Relationship between sphingolipids, pathogens, and aging. Uses cationic amphipathic drugs (CADs) to unveil the relationship of sphingolipids, which are natural cationic amphipaths, to pathogens and aging.

aging longevity pathogens lipids sphingolipids

Updated Jan 24, 2021
Jupyter Notebook

ccdmb / PathoPore

PathoPore - Longer Sequences and NextFlow Faster Analysis

nanopore pathogens nextflow-pipeline

Updated Nov 14, 2019
Nextflow

mattmar / dynamAedes

Mechanistic model to simulate population dynamics of Aedes mosquitoes.

modelling ecology invasive-species pathogens mosquitoes

Updated May 17, 2022
R

akarazeev / LauzHack19

🇨🇭

🦠 Service for pathogens and threats identification in hospital environments - SOPHiA Genetics

biopython ncbi viral-genomics lauzhack voila refseq pathogens lauzhack2019 brain-infections

Updated Nov 17, 2019
Jupyter Notebook

Improve this page

Add a description, image, and links to the pathogens topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the pathogens topic, visit your repo's landing page and select "manage topics."