seung-lab

Popular repositories

1. connected-components-3d Public

   Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants.

   C++ 150 27

2. euclidean-distance-transform-3d Public

   Euclidean distance transform for multi-label 3D anisotropic images using marching parabolas.

   C++ 127 27

3. znn-release Public archive

   Multi-core CPU implementation of deep learning for 2D and 3D sliding window convolutional networks (ConvNets).

   C++ 94 33

4. cloud-volume Public

   Read and write Neuroglancer datasets programmatically.

   Python 88 36

5. kimimaro Public

   Skeletonize densely labeled 3D image segmentations with TEASAR.

   Python 83 15

6. dijkstra3d Public

   Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes

   C++ 44 9