imaging

Fall.mat seems to contain all .npy outputs, except F_chan2 and Fneu_chan2. For convenience and consistency, it would be nice to include those in the Matlab out as well.

Per SVK's suggestion, it is worth exploring if one can use an autoencoder (regular or variational) instead of PCA for the sliding-window-based image denoising originally written by @ramav87 .

@saimani5 @markpoxley will you be interested in exploring it?

The spinning indicators give the impression that data is loading but that is not correct. An alternative that is not moving would be better.

Is your feature request related to a problem? Please describe.
In current version it is not possible to get just cell detection and cell analysis without cell classification. This could be potentially beneficial if you are analyzing cFos (nuclear) staining. With parameters that can be changed in cellfinder now I was able to get very good cFos detection results. When classification is done mor

Currently, we are having readthedocs.org build the documentation for each PR and, if there are any warnings, the build fails immediately. This is a good thing, because it ensures that every PR is generating good documentation, including running the examples.

As discussed in #271, it would be nice to be able to see all of the warnings for the doc build instead of failing on the first one. B