epigen-UCSD

MERlin Public
MERlin is an extensible analysis pipeline applied to decoding MERFISH data

Python 0 MIT 16 1 0 Updated Nov 12, 2021
epigen_ucsd_django Public

Python 1 0 140 0 Updated Jun 28, 2021
huang-natgen2021 Public

Jupyter Notebook 3 0 0 0 Updated Jun 27, 2021
utility_epigen Public

Shell 0 0 0 0 Updated Mar 5, 2021
atac_seq_pipeline Public

Python 4 0 10 0 Updated Mar 5, 2021
HiC_scripts Public
HiC processing scripts used in the center.

Jupyter Notebook 0 0 0 0 Updated Dec 10, 2020
chipseq_pipeline Public

Java 1 0 11 0 Updated Nov 15, 2019
atacMotif Public
Motif analysis of atac peaks

HTML 0 1 1 0 Updated Oct 9, 2019
SNAP-CHIP_epicypher Public
A tool for QC snap-chip from epicypher

Shell 0 0 4 0 Updated Sep 5, 2018
washUeg_json Public
A tool to generate json for http://epigenomegateway.wustl.edu/browser/

Shell 0 0 1 0 Updated Aug 3, 2018

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